Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 LTB4R2-202ENST00000528054 3092 ntBASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA3Q9Y5H0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 AC140113.3-201ENST00000605663 199 ntBASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 AC008622.2-201ENST00000617006 1229 ntBASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA3Q9Y5H0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 PRSS44-201ENST00000515154 1146 ntBASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 AP003041.3-201ENST00000527151 707 ntBASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 AC009237.14-201ENST00000609975 1594 ntBASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA3Q9Y5H0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 AP000523.1-201ENST00000398242 1049 ntBASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms