Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 AC091076.1-201ENST00000610741 619 ntBASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 AC026471.1-201ENST00000564629 3026 ntBASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA6Q9Y5G7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 TSPY5P-201ENST00000426936 936 ntBASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 YBX1P2-201ENST00000489612 999 ntBASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 AC139887.4-201ENST00000607877 719 ntBASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 AC141257.4-201ENST00000634557 245 ntBASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 AC136944.6-201ENST00000634818 245 ntBASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 AL031432.5-201ENST00000641059 760 ntBASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA6Q9Y5G7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA6Q9Y5G7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms