Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 KRT18P38-201ENST00000449496 1282 ntBASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 GCSHP2-201ENST00000560971 527 ntBASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHB2Q9Y5E7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB2Q9Y5E7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB2Q9Y5E7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHB2Q9Y5E7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB2Q9Y5E7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 AL671277.2-201ENST00000458060 996 ntBASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 AP000974.1-201ENST00000623909 2387 ntBASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB2Q9Y5E7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 AL023284.2-201ENST00000405850 579 ntBASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 AL121956.5-201ENST00000625261 221 ntBASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB2Q9Y5E7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 FAM86EP-206ENST00000510506 987 ntBASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms