Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 AC020763.4-201ENST00000623414 4170 ntBASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 AL353708.3-201ENST00000610272 989 ntBASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 AC083906.6-201ENST00000641366 219 ntBASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 WIZP1-201ENST00000531444 2299 ntBASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF11Q9Y3C5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 KRT8P11-201ENST00000409686 1436 ntBASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 FAM201B-201ENST00000458407 597 ntBASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNF11Q9Y3C5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF11Q9Y3C5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF11Q9Y3C5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF11Q9Y3C5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF11Q9Y3C5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF11Q9Y3C5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF11Q9Y3C5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 KSR1P1-201ENST00000446298 240 ntBASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 NOC2LP1-202ENST00000452600 2235 ntBASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF11Q9Y3C5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF11Q9Y3C5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms