Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 AC010240.3-201ENST00000607688 395 ntBASIC25.73■■□□□ 1.71
NINLQ9Y2I6 AL157888.1-201ENST00000631930 593 ntBASIC25.73■■□□□ 1.71
NINLQ9Y2I6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
NINLQ9Y2I6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 AC092597.1-201ENST00000487352 616 ntBASIC25.72■■□□□ 1.71
NINLQ9Y2I6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 HEIH-201ENST00000623091 1652 ntBASIC25.72■■□□□ 1.71
NINLQ9Y2I6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NINLQ9Y2I6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 AC079602.3-201ENST00000623931 403 ntBASIC25.71■■□□□ 1.71
NINLQ9Y2I6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NINLQ9Y2I6 PCDHAC2-203ENST00000615316 3011 ntBASIC25.71■■□□□ 1.71
NINLQ9Y2I6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
NINLQ9Y2I6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
NINLQ9Y2I6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
NINLQ9Y2I6 KRT18P41-201ENST00000518924 1277 ntBASIC25.7■■□□□ 1.71
NINLQ9Y2I6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
NINLQ9Y2I6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
NINLQ9Y2I6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC25.7■■□□□ 1.71
NINLQ9Y2I6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
NINLQ9Y2I6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 AL136038.4-201ENST00000603606 1261 ntBASIC25.69■■□□□ 1.7
NINLQ9Y2I6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 HCG4P8-203ENST00000443049 980 ntBASIC25.69■■□□□ 1.7
NINLQ9Y2I6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC25.69■■□□□ 1.7
NINLQ9Y2I6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NINLQ9Y2I6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms