Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX4Q9UIU6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SIX4Q9UIU6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SIX4Q9UIU6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SIX4Q9UIU6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.13■□□□□ 0.81
SIX4Q9UIU6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 AL441883.1-201ENST00000566170 1045 ntBASIC20.12■□□□□ 0.81
SIX4Q9UIU6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.12■□□□□ 0.81
SIX4Q9UIU6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX4Q9UIU6 AC098818.2-201ENST00000564925 2320 ntBASIC20.11■□□□□ 0.81
SIX4Q9UIU6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 DUX4L26-201ENST00000489078 1255 ntBASIC20.11■□□□□ 0.81
SIX4Q9UIU6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX4Q9UIU6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX4Q9UIU6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 Z98044.1-201ENST00000632503 1764 ntBASIC20.09■□□□□ 0.81
SIX4Q9UIU6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 AK4P3-201ENST00000418260 669 ntBASIC20.09■□□□□ 0.81
SIX4Q9UIU6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 CROCCP3-202ENST00000420820 1947 ntBASIC20.09■□□□□ 0.81
SIX4Q9UIU6 AC018445.3-201ENST00000624177 1945 ntBASIC20.09■□□□□ 0.81
SIX4Q9UIU6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SIX4Q9UIU6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIX4Q9UIU6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.08■□□□□ 0.81
SIX4Q9UIU6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIX4Q9UIU6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIX4Q9UIU6 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.08■□□□□ 0.81
SIX4Q9UIU6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.08■□□□□ 0.81
SIX4Q9UIU6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIX4Q9UIU6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.08■□□□□ 0.81
SIX4Q9UIU6 GCSHP2-201ENST00000560971 527 ntBASIC20.08■□□□□ 0.81
SIX4Q9UIU6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms