Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBQLN2Q9UHD9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 CICP6-201ENST00000457191 2729 ntBASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 AL162741.1-201ENST00000565563 1558 ntBASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 AC135776.1-201ENST00000319817 2481 ntBASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
UBQLN2Q9UHD9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 KRT87P-202ENST00000534226 1464 ntBASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBQLN2Q9UHD9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms