Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ECHDC1Q9NTX5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ECHDC1Q9NTX5 AL357033.4-201ENST00000617703 1807 ntBASIC22.92■■□□□ 1.26
ECHDC1Q9NTX5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.91■■□□□ 1.26
ECHDC1Q9NTX5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 AC211429.1-201ENST00000415277 523 ntBASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 MIR3180-5-201ENST00000583743 153 ntBASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
ECHDC1Q9NTX5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
ECHDC1Q9NTX5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
ECHDC1Q9NTX5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.89■■□□□ 1.26
ECHDC1Q9NTX5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ECHDC1Q9NTX5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 CR769767.2-201ENST00000622735 460 ntBASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.89■■□□□ 1.25
ECHDC1Q9NTX5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 ANO7L1-203ENST00000602586 1720 ntBASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 MIR564-202ENST00000385049 94 ntBASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 HMGA1P5-201ENST00000412453 271 ntBASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 WWOX-216ENST00000569818 525 ntBASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 KRT8P45-201ENST00000414328 1447 ntBASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 AC036111.1-201ENST00000533973 1582 ntBASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
ECHDC1Q9NTX5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ECHDC1Q9NTX5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ECHDC1Q9NTX5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ECHDC1Q9NTX5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
ECHDC1Q9NTX5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ECHDC1Q9NTX5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.86■■□□□ 1.25
ECHDC1Q9NTX5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ECHDC1Q9NTX5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ECHDC1Q9NTX5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.86■■□□□ 1.25
ECHDC1Q9NTX5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms