Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 SLC25A1P2-201ENST00000430693 912 ntBASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 AC068587.9-201ENST00000641814 219 ntBASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBQLN4Q9NRR5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 AL031598.1-201ENST00000561511 1773 ntBASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.3■□□□□ 0.36
UBQLN4Q9NRR5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 AL390955.1-201ENST00000428694 934 ntBASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 TSPY17P-201ENST00000450329 467 ntBASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 C2orf69P3-201ENST00000565542 1120 ntBASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.29■□□□□ 0.36
UBQLN4Q9NRR5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 RCC2P3-201ENST00000418112 1537 ntBASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 CCR12P-201ENST00000446203 998 ntBASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 AL023803.3-201ENST00000615559 522 ntBASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.28■□□□□ 0.36
UBQLN4Q9NRR5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms