Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 CYP2T1P-201ENST00000432607 1285 ntBASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 AC012313.1-201ENST00000593393 3059 ntBASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 ANO7L1-203ENST00000602586 1720 ntBASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 AC034268.1-201ENST00000441047 882 ntBASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 DUX4L16-201ENST00000555130 1264 ntBASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 TFP1-202ENST00000475455 1573 ntBASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SND1-IT1Q9HBX3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SND1-IT1Q9HBX3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms