Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 DUX4L2-201ENST00000561772 1275 ntBASIC17.93■□□□□ 0.46
VCX3BQ9H321 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 DUX4L6-201ENST00000626483 1275 ntBASIC17.93■□□□□ 0.46
VCX3BQ9H321 DUX4L1-201ENST00000627662 1275 ntBASIC17.93■□□□□ 0.46
VCX3BQ9H321 DUX4L8-201ENST00000629013 1275 ntBASIC17.93■□□□□ 0.46
VCX3BQ9H321 DUX4L3-201ENST00000630187 1275 ntBASIC17.93■□□□□ 0.46
VCX3BQ9H321 DUX4L7-201ENST00000630678 1275 ntBASIC17.93■□□□□ 0.46
VCX3BQ9H321 DUX4L5-201ENST00000630834 1275 ntBASIC17.93■□□□□ 0.46
VCX3BQ9H321 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 AC008894.3-201ENST00000624324 3103 ntBASIC17.93■□□□□ 0.46
VCX3BQ9H321 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.93■□□□□ 0.46
VCX3BQ9H321 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCX3BQ9H321 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 CCDC92B-201ENST00000575506 885 ntBASIC17.92■□□□□ 0.46
VCX3BQ9H321 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.92■□□□□ 0.46
VCX3BQ9H321 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCX3BQ9H321 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 MST1L-201ENST00000442552 2185 ntBASIC17.91■□□□□ 0.46
VCX3BQ9H321 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 TSPY26P-201ENST00000476365 1326 ntBASIC17.91■□□□□ 0.46
VCX3BQ9H321 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCX3BQ9H321 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.91■□□□□ 0.46
VCX3BQ9H321 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 AL513477.1-201ENST00000602865 2407 ntBASIC17.9■□□□□ 0.46
VCX3BQ9H321 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 FEM1AP3-201ENST00000403722 1741 ntBASIC17.9■□□□□ 0.46
VCX3BQ9H321 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 AC009299.2-201ENST00000482477 511 ntBASIC17.9■□□□□ 0.46
VCX3BQ9H321 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VCX3BQ9H321 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.9■□□□□ 0.46
VCX3BQ9H321 MIR4767-201ENST00000582827 78 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms