Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF38Q9H0F5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 IER3-202ENST00000376377 1350 ntBASIC19.5■□□□□ 0.71
RNF38Q9H0F5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 SPDYE13P-201ENST00000445314 798 ntBASIC19.5■□□□□ 0.71
RNF38Q9H0F5 SEC1P-202ENST00000473944 940 ntBASIC19.5■□□□□ 0.71
RNF38Q9H0F5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 AL136038.3-201ENST00000561909 1096 ntBASIC19.5■□□□□ 0.71
RNF38Q9H0F5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF38Q9H0F5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.49■□□□□ 0.71
RNF38Q9H0F5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF38Q9H0F5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 HBZP1-201ENST00000354915 429 ntBASIC19.48■□□□□ 0.71
RNF38Q9H0F5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.48■□□□□ 0.71
RNF38Q9H0F5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 VENTXP5-201ENST00000523979 775 ntBASIC19.48■□□□□ 0.71
RNF38Q9H0F5 AC112497.1-201ENST00000624824 639 ntBASIC19.48■□□□□ 0.71
RNF38Q9H0F5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF38Q9H0F5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RNF38Q9H0F5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms