Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUDCD1Q96RS6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUDCD1Q96RS6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUDCD1Q96RS6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.47■□□□□ 0.71
NUDCD1Q96RS6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUDCD1Q96RS6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUDCD1Q96RS6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 AC091390.4-202ENST00000476426 537 ntBASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 REXO1L10P-201ENST00000615707 1290 ntBASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 AC011298.2-201ENST00000617989 482 ntBASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 AC130371.2-201ENST00000619443 611 ntBASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 REXO1L12P-201ENST00000622156 912 ntBASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 KRT17P2-201ENST00000300992 1314 ntBASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUDCD1Q96RS6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 BCL2-203ENST00000589955 5011 ntBASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NUDCD1Q96RS6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 AC008040.2-201ENST00000461049 708 ntBASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 AL032819.2-201ENST00000624543 2162 ntBASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUDCD1Q96RS6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.43■□□□□ 0.7
NUDCD1Q96RS6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms