Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 BX088651.1-201ENST00000540551 451 ntBASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COX4I2Q96KJ9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 PNMA6B-201ENST00000538162 1200 ntBASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
COX4I2Q96KJ9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 AL355472.2-201ENST00000422958 438 ntBASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COX4I2Q96KJ9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COX4I2Q96KJ9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.41■□□□□ 0.38
COX4I2Q96KJ9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.41■□□□□ 0.38
COX4I2Q96KJ9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COX4I2Q96KJ9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COX4I2Q96KJ9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COX4I2Q96KJ9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
COX4I2Q96KJ9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms