Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 PCDHB18P-201ENST00000524813 2368 ntBASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 ZNF885P-201ENST00000420174 1098 ntBASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 AC016550.3-201ENST00000515706 767 ntBASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 AC024267.5-201ENST00000579154 599 ntBASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 AC004264.1-201ENST00000608354 794 ntBASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 AL133373.2-201ENST00000623187 2828 ntBASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.03■□□□□ 0.32
MS4A3Q96HJ5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 UBE2SP1-201ENST00000450587 669 ntBASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 AC126365.2-201ENST00000580630 379 ntBASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MS4A3Q96HJ5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A3Q96HJ5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A3Q96HJ5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A3Q96HJ5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A3Q96HJ5 AC083899.2-201ENST00000423285 1376 ntBASIC17.02■□□□□ 0.31
MS4A3Q96HJ5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MS4A3Q96HJ5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
MS4A3Q96HJ5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 KRT16P5-201ENST00000455284 522 ntBASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 KRT18P16-201ENST00000510337 1294 ntBASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MS4A3Q96HJ5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17■□□□□ 0.31
MS4A3Q96HJ5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17■□□□□ 0.31
MS4A3Q96HJ5 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC17■□□□□ 0.31
MS4A3Q96HJ5 MME-217ENST00000616757 1315 ntTSL 5 BASIC17■□□□□ 0.31
MS4A3Q96HJ5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MS4A3Q96HJ5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms