Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.89■□□□□ 0.29
CPNE4Q96A23 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE4Q96A23 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE4Q96A23 INGX-201ENST00000359239 846 ntBASIC16.89■□□□□ 0.29
CPNE4Q96A23 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 LIN28AP1-201ENST00000429574 405 ntBASIC16.89■□□□□ 0.29
CPNE4Q96A23 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.89■□□□□ 0.29
CPNE4Q96A23 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE4Q96A23 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE4Q96A23 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE4Q96A23 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE4Q96A23 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE4Q96A23 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE4Q96A23 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE4Q96A23 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE4Q96A23 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE4Q96A23 AL161938.1-201ENST00000569833 2180 ntBASIC16.88■□□□□ 0.29
CPNE4Q96A23 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE4Q96A23 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE4Q96A23 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE4Q96A23 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE4Q96A23 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 AL137013.1-201ENST00000432946 1228 ntBASIC16.88■□□□□ 0.29
CPNE4Q96A23 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE4Q96A23 ATP5G1P1-201ENST00000448724 379 ntBASIC16.88■□□□□ 0.29
CPNE4Q96A23 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE4Q96A23 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE4Q96A23 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE4Q96A23 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE4Q96A23 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CPNE4Q96A23 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 AL512353.2-201ENST00000448759 1962 ntBASIC16.86■□□□□ 0.29
CPNE4Q96A23 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 MCCD1P1-208ENST00000445732 328 ntBASIC16.86■□□□□ 0.29
CPNE4Q96A23 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms