Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.8■□□□□ 0.76
ATP2A3Q93084 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP2A3Q93084 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP2A3Q93084 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.78■□□□□ 0.76
ATP2A3Q93084 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.78■□□□□ 0.76
ATP2A3Q93084 AP003041.3-201ENST00000527151 707 ntBASIC19.78■□□□□ 0.76
ATP2A3Q93084 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP2A3Q93084 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP2A3Q93084 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
ATP2A3Q93084 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A3Q93084 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A3Q93084 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A3Q93084 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
ATP2A3Q93084 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A3Q93084 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A3Q93084 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ATP2A3Q93084 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP2A3Q93084 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP2A3Q93084 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ATP2A3Q93084 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP2A3Q93084 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP2A3Q93084 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.77■□□□□ 0.76
ATP2A3Q93084 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.77■□□□□ 0.76
ATP2A3Q93084 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms