Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHF3Q92576 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.97■□□□□ 0.31
PHF3Q92576 DUSP5P1-201ENST00000441325 1139 ntBASIC16.97■□□□□ 0.31
PHF3Q92576 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.97■□□□□ 0.31
PHF3Q92576 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.97■□□□□ 0.31
PHF3Q92576 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.97■□□□□ 0.31
PHF3Q92576 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.97■□□□□ 0.31
PHF3Q92576 FP475955.4-201ENST00000623131 1990 ntBASIC16.97■□□□□ 0.31
PHF3Q92576 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.97■□□□□ 0.31
PHF3Q92576 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PHF3Q92576 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.97■□□□□ 0.31
PHF3Q92576 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PHF3Q92576 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.97■□□□□ 0.31
PHF3Q92576 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.97■□□□□ 0.31
PHF3Q92576 AL671277.2-201ENST00000458060 996 ntBASIC16.97■□□□□ 0.31
PHF3Q92576 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.97■□□□□ 0.31
PHF3Q92576 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.97■□□□□ 0.31
PHF3Q92576 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.97■□□□□ 0.31
PHF3Q92576 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PHF3Q92576 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.97■□□□□ 0.31
PHF3Q92576 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.97■□□□□ 0.31
PHF3Q92576 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHF3Q92576 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.96■□□□□ 0.31
PHF3Q92576 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 AC004408.2-201ENST00000623613 2777 ntBASIC16.96■□□□□ 0.31
PHF3Q92576 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PHF3Q92576 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.96■□□□□ 0.31
PHF3Q92576 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.96■□□□□ 0.31
PHF3Q92576 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.96■□□□□ 0.31
PHF3Q92576 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.96■□□□□ 0.31
PHF3Q92576 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PHF3Q92576 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.96■□□□□ 0.31
PHF3Q92576 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 AL161938.1-201ENST00000569833 2180 ntBASIC16.96■□□□□ 0.31
PHF3Q92576 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PHF3Q92576 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHF3Q92576 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHF3Q92576 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHF3Q92576 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.96■□□□□ 0.3
PHF3Q92576 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHF3Q92576 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PHF3Q92576 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PHF3Q92576 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PHF3Q92576 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.96■□□□□ 0.3
PHF3Q92576 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.96■□□□□ 0.3
PHF3Q92576 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.96■□□□□ 0.3
PHF3Q92576 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PHF3Q92576 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.96■□□□□ 0.3
PHF3Q92576 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.96■□□□□ 0.3
PHF3Q92576 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHF3Q92576 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PHF3Q92576 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PHF3Q92576 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.95■□□□□ 0.3
PHF3Q92576 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.95■□□□□ 0.3
PHF3Q92576 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PHF3Q92576 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.95■□□□□ 0.3
PHF3Q92576 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PHF3Q92576 KRT8P45-201ENST00000414328 1447 ntBASIC16.95■□□□□ 0.3
PHF3Q92576 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
PHF3Q92576 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 AP000523.1-201ENST00000398242 1049 ntBASIC16.95■□□□□ 0.3
PHF3Q92576 HCG4P8-203ENST00000443049 980 ntBASIC16.95■□□□□ 0.3
PHF3Q92576 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.95■□□□□ 0.3
PHF3Q92576 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.95■□□□□ 0.3
PHF3Q92576 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.95■□□□□ 0.3
PHF3Q92576 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.95■□□□□ 0.3
PHF3Q92576 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.95■□□□□ 0.3
PHF3Q92576 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PHF3Q92576 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms