Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NME8Q8N427 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.72■□□□□ 0.91
NME8Q8N427 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NME8Q8N427 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NME8Q8N427 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
NME8Q8N427 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.72■□□□□ 0.91
NME8Q8N427 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.72■□□□□ 0.91
NME8Q8N427 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.72■□□□□ 0.91
NME8Q8N427 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.72■□□□□ 0.91
NME8Q8N427 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.72■□□□□ 0.91
NME8Q8N427 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NME8Q8N427 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NME8Q8N427 AL109659.2-201ENST00000606809 1674 ntBASIC20.72■□□□□ 0.91
NME8Q8N427 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NME8Q8N427 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NME8Q8N427 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.72■□□□□ 0.91
NME8Q8N427 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.72■□□□□ 0.91
NME8Q8N427 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NME8Q8N427 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
NME8Q8N427 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.71■□□□□ 0.91
NME8Q8N427 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.71■□□□□ 0.91
NME8Q8N427 KRT18P56-201ENST00000507275 550 ntBASIC20.71■□□□□ 0.91
NME8Q8N427 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.71■□□□□ 0.91
NME8Q8N427 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.71■□□□□ 0.91
NME8Q8N427 AC069148.1-201ENST00000608741 768 ntBASIC20.71■□□□□ 0.91
NME8Q8N427 AC112497.1-201ENST00000624824 639 ntBASIC20.71■□□□□ 0.91
NME8Q8N427 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.71■□□□□ 0.91
NME8Q8N427 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.71■□□□□ 0.91
NME8Q8N427 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.71■□□□□ 0.91
NME8Q8N427 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NME8Q8N427 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NME8Q8N427 AC125437.2-201ENST00000625180 2167 ntBASIC20.7■□□□□ 0.91
NME8Q8N427 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NME8Q8N427 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 FEM1AP3-201ENST00000403722 1741 ntBASIC20.7■□□□□ 0.9
NME8Q8N427 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NME8Q8N427 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NME8Q8N427 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.7■□□□□ 0.9
NME8Q8N427 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.7■□□□□ 0.9
NME8Q8N427 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
NME8Q8N427 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.7■□□□□ 0.9
NME8Q8N427 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NME8Q8N427 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.7■□□□□ 0.9
NME8Q8N427 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 AL512353.2-201ENST00000448759 1962 ntBASIC20.7■□□□□ 0.9
NME8Q8N427 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NME8Q8N427 KRT8P7-201ENST00000533003 1432 ntBASIC20.7■□□□□ 0.9
NME8Q8N427 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.69■□□□□ 0.9
NME8Q8N427 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.69■□□□□ 0.9
NME8Q8N427 SPDYE13P-201ENST00000445314 798 ntBASIC20.69■□□□□ 0.9
NME8Q8N427 SEC1P-202ENST00000473944 940 ntBASIC20.69■□□□□ 0.9
NME8Q8N427 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.69■□□□□ 0.9
NME8Q8N427 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.69■□□□□ 0.9
NME8Q8N427 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.69■□□□□ 0.9
NME8Q8N427 AC093458.2-201ENST00000623150 629 ntBASIC20.69■□□□□ 0.9
NME8Q8N427 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.69■□□□□ 0.9
NME8Q8N427 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NME8Q8N427 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NME8Q8N427 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NME8Q8N427 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.68■□□□□ 0.9
NME8Q8N427 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NME8Q8N427 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NME8Q8N427 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NME8Q8N427 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.68■□□□□ 0.9
NME8Q8N427 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NME8Q8N427 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.68■□□□□ 0.9
NME8Q8N427 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.68■□□□□ 0.9
NME8Q8N427 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms