Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 AL590326.2-201ENST00000625139 305 ntBASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRIM48Q8IWZ4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.54
TRIM48Q8IWZ4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM48Q8IWZ4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 AK4P3-201ENST00000418260 669 ntBASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM48Q8IWZ4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 DUX4L26-201ENST00000489078 1255 ntBASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 AC141257.4-201ENST00000634557 245 ntBASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 AC136944.6-201ENST00000634818 245 ntBASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms