Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC011298.2-201ENST00000617989 482 ntBASIC17.42■□□□□ 0.38
VRK2Q86Y07 ITM2C-210ENST00000620962 501 ntBASIC17.42■□□□□ 0.38
VRK2Q86Y07 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VRK2Q86Y07 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VRK2Q86Y07 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VRK2Q86Y07 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VRK2Q86Y07 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
VRK2Q86Y07 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK2Q86Y07 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK2Q86Y07 AC138932.1-201ENST00000534164 6830 ntBASIC17.42■□□□□ 0.38
VRK2Q86Y07 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK2Q86Y07 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK2Q86Y07 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
VRK2Q86Y07 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 RARRES2P10-201ENST00000564312 460 ntBASIC17.41■□□□□ 0.38
VRK2Q86Y07 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 AC073195.1-201ENST00000607241 877 ntBASIC17.41■□□□□ 0.38
VRK2Q86Y07 AL031985.4-201ENST00000642138 673 ntBASIC17.41■□□□□ 0.38
VRK2Q86Y07 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VRK2Q86Y07 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VRK2Q86Y07 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VRK2Q86Y07 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.4■□□□□ 0.38
VRK2Q86Y07 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
VRK2Q86Y07 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.39■□□□□ 0.38
VRK2Q86Y07 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
VRK2Q86Y07 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VRK2Q86Y07 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 AC011506.1-201ENST00000474329 610 ntBASIC17.39■□□□□ 0.37
VRK2Q86Y07 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 AC068587.9-201ENST00000641814 219 ntBASIC17.39■□□□□ 0.37
VRK2Q86Y07 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VRK2Q86Y07 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.39■□□□□ 0.37
VRK2Q86Y07 AC126763.1-201ENST00000552015 2118 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms