Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AL353719.1-201ENST00000566847 864 ntBASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 AC066615.1-201ENST00000640911 628 ntBASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 GPAT2P1-201ENST00000444924 1672 ntBASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COLCA1Q6ZS62 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 TSPY17P-201ENST00000450329 467 ntBASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 AC093827.2-201ENST00000512654 315 ntBASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 KRT18P41-201ENST00000518924 1277 ntBASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 AC008556.1-201ENST00000610908 2040 ntBASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 AC092338.2-201ENST00000568827 1415 ntBASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.19■□□□□ 0.18
COLCA1Q6ZS62 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 MIR564-202ENST00000385049 94 ntBASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 MIR1238-201ENST00000408483 83 ntBASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 AL596275.1-201ENST00000423464 877 ntBASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 AL390955.1-201ENST00000428694 934 ntBASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 MCCD1P1-208ENST00000445732 328 ntBASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 TSPY15P-201ENST00000457163 923 ntBASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 KRT8P45-201ENST00000414328 1447 ntBASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COLCA1Q6ZS62 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 TSPY14P-201ENST00000303979 915 ntBASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms