Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRAT1Q6PJG6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.84■□□□□ 0.61
BRAT1Q6PJG6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRAT1Q6PJG6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRAT1Q6PJG6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRAT1Q6PJG6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRAT1Q6PJG6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRAT1Q6PJG6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 LINC01238-205ENST00000567549 1107 ntBASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.83■□□□□ 0.6
BRAT1Q6PJG6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 HEIH-201ENST00000623091 1652 ntBASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 TSPY5P-201ENST00000426936 936 ntBASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 AC063952.2-201ENST00000498792 1227 ntBASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 AC011558.1-201ENST00000623459 338 ntBASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 AL023973.1-201ENST00000624619 620 ntBASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 AC083906.6-201ENST00000641366 219 ntBASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRAT1Q6PJG6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 MIR564-202ENST00000385049 94 ntBASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 KRT8P7-201ENST00000533003 1432 ntBASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRAT1Q6PJG6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms