Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.61■□□□□ 0.73
RFWD3Q6PCD5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 HMGA1P5-201ENST00000412453 271 ntBASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 LIN28AP1-201ENST00000429574 405 ntBASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 ATP5G1P1-201ENST00000448724 379 ntBASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 AC010653.2-201ENST00000623505 997 ntBASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFWD3Q6PCD5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 AC005332.8-201ENST00000622750 2735 ntBASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.59■□□□□ 0.73
RFWD3Q6PCD5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFWD3Q6PCD5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFWD3Q6PCD5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFWD3Q6PCD5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFWD3Q6PCD5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFWD3Q6PCD5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.58■□□□□ 0.73
RFWD3Q6PCD5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFWD3Q6PCD5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RFWD3Q6PCD5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 MIR1224-201ENST00000408193 85 ntBASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms