Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 GCSHP2-201ENST00000560971 527 ntBASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H3F3CQ6NXT2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.39■□□□□ 0.38
H3F3CQ6NXT2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
H3F3CQ6NXT2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
H3F3CQ6NXT2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 KRT18P38-201ENST00000449496 1282 ntBASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 AL359075.1-203ENST00000462729 1002 ntBASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 AC091076.1-201ENST00000610741 619 ntBASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 AL121956.5-201ENST00000625261 221 ntBASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
H3F3CQ6NXT2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 MCCD1P1-208ENST00000445732 328 ntBASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 MIR3180-5-201ENST00000583743 153 ntBASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
H3F3CQ6NXT2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 AL671277.2-201ENST00000458060 996 ntBASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 FAM86EP-206ENST00000510506 987 ntBASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 AL358472.4-201ENST00000633140 710 ntBASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms