Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 KRT18P22-201ENST00000402024 1347 ntBASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 AC211429.1-201ENST00000415277 523 ntBASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 FAM87A-204ENST00000613235 858 ntBASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 AC068587.9-201ENST00000641814 219 ntBASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP4R3AQ6IN85 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 MIR4674-201ENST00000582457 87 ntBASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 GPAT2P1-201ENST00000444924 1672 ntBASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 AP000974.1-201ENST00000623909 2387 ntBASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.37■■□□□ 1.01
PPP4R3AQ6IN85 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 AL023284.2-201ENST00000405850 579 ntBASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 ECEL1P2-202ENST00000465689 757 ntBASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 AL109659.2-201ENST00000606809 1674 ntBASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PPP4R3AQ6IN85 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 HEIH-201ENST00000623091 1652 ntBASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PPP4R3AQ6IN85 RCC2P3-201ENST00000418112 1537 ntBASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 AC087289.5-201ENST00000586076 3175 ntBASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms