Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LPCAT4Q643R3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 AC022211.2-201ENST00000585075 2527 ntBASIC17.75■□□□□ 0.43
LPCAT4Q643R3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LPCAT4Q643R3 TFP1-202ENST00000475455 1573 ntBASIC17.74■□□□□ 0.43
LPCAT4Q643R3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 AC018695.7-201ENST00000624587 2492 ntBASIC17.74■□□□□ 0.43
LPCAT4Q643R3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 AC138028.4-201ENST00000564984 1845 ntBASIC17.74■□□□□ 0.43
LPCAT4Q643R3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LPCAT4Q643R3 PP12613-201ENST00000424958 2230 ntBASIC17.74■□□□□ 0.43
LPCAT4Q643R3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 AL499627.1-201ENST00000569373 2188 ntBASIC17.73■□□□□ 0.43
LPCAT4Q643R3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 SLC25A6P5-201ENST00000435663 894 ntBASIC17.73■□□□□ 0.43
LPCAT4Q643R3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.73■□□□□ 0.43
LPCAT4Q643R3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
LPCAT4Q643R3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms