Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 AL023803.3-201ENST00000615559 522 ntBASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 AC010653.2-201ENST00000623505 997 ntBASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.6■□□□□ 0.73
TTC39BQ5VTQ0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 AC005363.2-201ENST00000618631 242 ntBASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 CROCCP3-202ENST00000420820 1947 ntBASIC19.59■□□□□ 0.73
TTC39BQ5VTQ0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TTC39BQ5VTQ0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 AL353719.1-201ENST00000566847 864 ntBASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 AC092338.2-201ENST00000568827 1415 ntBASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC39BQ5VTQ0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 AL161938.1-201ENST00000569833 2180 ntBASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 TEX21P-204ENST00000641479 1693 ntBASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 NEFHP1-201ENST00000412845 2629 ntBASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC39BQ5VTQ0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.56■□□□□ 0.72
TTC39BQ5VTQ0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC39BQ5VTQ0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms