Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH17Q12864 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH17Q12864 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH17Q12864 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH17Q12864 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH17Q12864 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH17Q12864 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH17Q12864 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH17Q12864 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH17Q12864 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CDH17Q12864 ABHD17AP1-201ENST00000358206 933 ntBASIC19.02■□□□□ 0.64
CDH17Q12864 AC233702.5-201ENST00000584107 538 ntBASIC19.02■□□□□ 0.64
CDH17Q12864 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.02■□□□□ 0.64
CDH17Q12864 AC090164.3-201ENST00000610780 2143 ntBASIC19.02■□□□□ 0.64
CDH17Q12864 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH17Q12864 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH17Q12864 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CDH17Q12864 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CDH17Q12864 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.02■□□□□ 0.63
CDH17Q12864 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH17Q12864 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.02■□□□□ 0.63
CDH17Q12864 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH17Q12864 AC005082.1-201ENST00000413042 2259 ntBASIC19.02■□□□□ 0.63
CDH17Q12864 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.02■□□□□ 0.63
CDH17Q12864 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CDH17Q12864 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.02■□□□□ 0.63
CDH17Q12864 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDH17Q12864 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 MTMR9LP-203ENST00000426597 1545 ntBASIC19.01■□□□□ 0.63
CDH17Q12864 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 AC009113.1-201ENST00000570267 2443 ntBASIC19.01■□□□□ 0.63
CDH17Q12864 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDH17Q12864 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 AC104581.1-202ENST00000635932 2618 ntBASIC19.01■□□□□ 0.63
CDH17Q12864 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH17Q12864 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDH17Q12864 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
CDH17Q12864 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 AC116562.2-201ENST00000507042 360 ntBASIC19.01■□□□□ 0.63
CDH17Q12864 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 NUDT16P1-203ENST00000513809 620 ntBASIC19.01■□□□□ 0.63
CDH17Q12864 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH17Q12864 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH17Q12864 DGCR10-201ENST00000609839 495 ntBASIC19.01■□□□□ 0.63
CDH17Q12864 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH17Q12864 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CDH17Q12864 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH17Q12864 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH17Q12864 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH17Q12864 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.01■□□□□ 0.63
CDH17Q12864 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH17Q12864 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH17Q12864 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDH17Q12864 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CDH17Q12864 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDH17Q12864 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19■□□□□ 0.63
CDH17Q12864 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19■□□□□ 0.63
CDH17Q12864 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19■□□□□ 0.63
CDH17Q12864 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CDH17Q12864 AC113410.3-201ENST00000623366 203 ntBASIC19■□□□□ 0.63
CDH17Q12864 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 AL049637.2-201ENST00000641778 930 ntBASIC19■□□□□ 0.63
CDH17Q12864 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19■□□□□ 0.63
CDH17Q12864 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19■□□□□ 0.63
CDH17Q12864 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDH17Q12864 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH17Q12864 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDH17Q12864 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms