Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.83■□□□□ 0.28
H3F3AP84243 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H3F3AP84243 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
H3F3AP84243 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
H3F3AP84243 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.83■□□□□ 0.28
H3F3AP84243 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
H3F3AP84243 AC145285.6-201ENST00000604632 637 ntBASIC16.83■□□□□ 0.28
H3F3AP84243 AL109659.2-201ENST00000606809 1674 ntBASIC16.83■□□□□ 0.28
H3F3AP84243 AC012306.2-201ENST00000609350 630 ntBASIC16.83■□□□□ 0.28
H3F3AP84243 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
H3F3AP84243 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
H3F3AP84243 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
H3F3AP84243 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.83■□□□□ 0.28
H3F3AP84243 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
H3F3AP84243 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.82■□□□□ 0.28
H3F3AP84243 CROCCP3-202ENST00000420820 1947 ntBASIC16.82■□□□□ 0.28
H3F3AP84243 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.82■□□□□ 0.28
H3F3AP84243 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.82■□□□□ 0.28
H3F3AP84243 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
H3F3AP84243 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
H3F3AP84243 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
H3F3AP84243 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H3F3AP84243 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3F3AP84243 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3F3AP84243 INGX-201ENST00000359239 846 ntBASIC16.82■□□□□ 0.28
H3F3AP84243 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H3F3AP84243 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3F3AP84243 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.82■□□□□ 0.28
H3F3AP84243 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H3F3AP84243 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H3F3AP84243 AC128688.1-201ENST00000487626 519 ntBASIC16.82■□□□□ 0.28
H3F3AP84243 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.82■□□□□ 0.28
H3F3AP84243 AP003041.3-201ENST00000527151 707 ntBASIC16.82■□□□□ 0.28
H3F3AP84243 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.82■□□□□ 0.28
H3F3AP84243 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H3F3AP84243 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.82■□□□□ 0.28
H3F3AP84243 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
H3F3AP84243 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H3F3AP84243 TNXA-203ENST00000507684 2038 ntBASIC16.82■□□□□ 0.28
H3F3AP84243 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H3F3AP84243 GPAT2P1-201ENST00000444924 1672 ntBASIC16.81■□□□□ 0.28
H3F3AP84243 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3F3AP84243 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H3F3AP84243 AC093525.10-201ENST00000625130 1569 ntBASIC16.81■□□□□ 0.28
H3F3AP84243 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.81■□□□□ 0.28
H3F3AP84243 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3F3AP84243 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.81■□□□□ 0.28
H3F3AP84243 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
H3F3AP84243 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
H3F3AP84243 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
H3F3AP84243 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3F3AP84243 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3F3AP84243 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.81■□□□□ 0.28
H3F3AP84243 AL023284.2-201ENST00000405850 579 ntBASIC16.81■□□□□ 0.28
H3F3AP84243 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
H3F3AP84243 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.81■□□□□ 0.28
H3F3AP84243 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H3F3AP84243 AC097493.4-201ENST00000641197 219 ntBASIC16.81■□□□□ 0.28
H3F3AP84243 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3F3AP84243 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.81■□□□□ 0.28
H3F3AP84243 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H3F3AP84243 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.81■□□□□ 0.28
H3F3AP84243 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
H3F3AP84243 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.81■□□□□ 0.28
H3F3AP84243 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.8■□□□□ 0.28
H3F3AP84243 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
H3F3AP84243 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 LINC01568-207ENST00000641790 1380 ntBASIC16.8■□□□□ 0.28
H3F3AP84243 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.8■□□□□ 0.28
H3F3AP84243 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
H3F3AP84243 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
H3F3AP84243 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.8■□□□□ 0.28
H3F3AP84243 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.8■□□□□ 0.28
H3F3AP84243 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
H3F3AP84243 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.8■□□□□ 0.28
H3F3AP84243 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.8■□□□□ 0.28
H3F3AP84243 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
H3F3AP84243 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
H3F3AP84243 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 RCC2P3-201ENST00000418112 1537 ntBASIC16.8■□□□□ 0.28
H3F3AP84243 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H3F3AP84243 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.8■□□□□ 0.28
H3F3AP84243 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
H3F3AP84243 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.79■□□□□ 0.28
H3F3AP84243 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.79■□□□□ 0.28
H3F3AP84243 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
H3F3AP84243 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.79■□□□□ 0.28
H3F3AP84243 KRT18P22-201ENST00000402024 1347 ntBASIC16.79■□□□□ 0.28
H3F3AP84243 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms