Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IRX4P78413 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
IRX4P78413 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
IRX4P78413 AP001271.2-201ENST00000624018 1556 ntBASIC19.54■□□□□ 0.72
IRX4P78413 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.54■□□□□ 0.72
IRX4P78413 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.54■□□□□ 0.72
IRX4P78413 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.54■□□□□ 0.72
IRX4P78413 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
IRX4P78413 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.54■□□□□ 0.72
IRX4P78413 BX664615.1-201ENST00000443558 458 ntBASIC19.54■□□□□ 0.72
IRX4P78413 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.54■□□□□ 0.72
IRX4P78413 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.54■□□□□ 0.72
IRX4P78413 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.54■□□□□ 0.72
IRX4P78413 AP005242.2-201ENST00000580065 1175 ntBASIC19.54■□□□□ 0.72
IRX4P78413 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.54■□□□□ 0.72
IRX4P78413 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.54■□□□□ 0.72
IRX4P78413 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
IRX4P78413 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
IRX4P78413 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX4P78413 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.53■□□□□ 0.72
IRX4P78413 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
IRX4P78413 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.53■□□□□ 0.72
IRX4P78413 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
IRX4P78413 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
IRX4P78413 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.53■□□□□ 0.72
IRX4P78413 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
IRX4P78413 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
IRX4P78413 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
IRX4P78413 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
IRX4P78413 AC128688.1-201ENST00000487626 519 ntBASIC19.53■□□□□ 0.72
IRX4P78413 AC022616.7-201ENST00000525383 220 ntBASIC19.53■□□□□ 0.72
IRX4P78413 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.53■□□□□ 0.72
IRX4P78413 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
IRX4P78413 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 NEFHP1-201ENST00000412845 2629 ntBASIC19.53■□□□□ 0.72
IRX4P78413 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX4P78413 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
IRX4P78413 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
IRX4P78413 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
IRX4P78413 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
IRX4P78413 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 INGX-201ENST00000359239 846 ntBASIC19.52■□□□□ 0.72
IRX4P78413 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 CRYGFP-201ENST00000418459 633 ntBASIC19.52■□□□□ 0.72
IRX4P78413 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.52■□□□□ 0.72
IRX4P78413 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.52■□□□□ 0.72
IRX4P78413 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 AC011506.1-201ENST00000474329 610 ntBASIC19.52■□□□□ 0.72
IRX4P78413 AC063952.2-201ENST00000498792 1227 ntBASIC19.52■□□□□ 0.72
IRX4P78413 AC097488.1-201ENST00000507834 756 ntBASIC19.52■□□□□ 0.72
IRX4P78413 LINC01238-205ENST00000567549 1107 ntBASIC19.52■□□□□ 0.72
IRX4P78413 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.52■□□□□ 0.72
IRX4P78413 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
IRX4P78413 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
IRX4P78413 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX4P78413 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.52■□□□□ 0.72
IRX4P78413 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.52■□□□□ 0.71
IRX4P78413 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
IRX4P78413 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
IRX4P78413 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
IRX4P78413 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.52■□□□□ 0.71
IRX4P78413 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
IRX4P78413 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
IRX4P78413 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
IRX4P78413 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
IRX4P78413 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms