Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.89■□□□□ 0.45
GABREP78334 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.89■□□□□ 0.45
GABREP78334 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.89■□□□□ 0.45
GABREP78334 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.89■□□□□ 0.45
GABREP78334 TPSP2-201ENST00000561760 610 ntBASIC17.89■□□□□ 0.45
GABREP78334 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.89■□□□□ 0.45
GABREP78334 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.89■□□□□ 0.45
GABREP78334 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.89■□□□□ 0.45
GABREP78334 AC112497.1-201ENST00000624824 639 ntBASIC17.89■□□□□ 0.45
GABREP78334 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.89■□□□□ 0.45
GABREP78334 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.89■□□□□ 0.45
GABREP78334 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GABREP78334 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.89■□□□□ 0.45
GABREP78334 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.89■□□□□ 0.45
GABREP78334 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 AL391807.1-203ENST00000604392 2365 ntBASIC17.88■□□□□ 0.45
GABREP78334 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
GABREP78334 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 DRAXINP1-201ENST00000437611 948 ntBASIC17.88■□□□□ 0.45
GABREP78334 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GABREP78334 AC079781.3-201ENST00000449110 356 ntBASIC17.88■□□□□ 0.45
GABREP78334 FOSL1P1-201ENST00000511041 816 ntBASIC17.88■□□□□ 0.45
GABREP78334 AL160237.2-201ENST00000556165 472 ntBASIC17.88■□□□□ 0.45
GABREP78334 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.88■□□□□ 0.45
GABREP78334 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GABREP78334 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
GABREP78334 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
GABREP78334 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
GABREP78334 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GABREP78334 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GABREP78334 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.87■□□□□ 0.45
GABREP78334 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
GABREP78334 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
GABREP78334 MIR662-201ENST00000384847 95 ntBASIC17.87■□□□□ 0.45
GABREP78334 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.87■□□□□ 0.45
GABREP78334 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.87■□□□□ 0.45
GABREP78334 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.87■□□□□ 0.45
GABREP78334 TOB2P1-201ENST00000469761 992 ntBASIC17.87■□□□□ 0.45
GABREP78334 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
GABREP78334 MIR3917-201ENST00000580971 93 ntBASIC17.87■□□□□ 0.45
GABREP78334 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.87■□□□□ 0.45
GABREP78334 AC104692.2-201ENST00000603054 253 ntBASIC17.87■□□□□ 0.45
GABREP78334 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.87■□□□□ 0.45
GABREP78334 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GABREP78334 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
GABREP78334 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GABREP78334 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GABREP78334 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GABREP78334 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.86■□□□□ 0.45
GABREP78334 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GABREP78334 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GABREP78334 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.86■□□□□ 0.45
GABREP78334 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.86■□□□□ 0.45
GABREP78334 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.86■□□□□ 0.45
GABREP78334 AC012615.1-201ENST00000565797 1299 ntBASIC17.86■□□□□ 0.45
GABREP78334 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
GABREP78334 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
GABREP78334 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GABREP78334 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.86■□□□□ 0.45
GABREP78334 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GABREP78334 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.86■□□□□ 0.45
GABREP78334 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GABREP78334 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.86■□□□□ 0.45
GABREP78334 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
GABREP78334 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GABREP78334 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GABREP78334 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.86■□□□□ 0.45
GABREP78334 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GABREP78334 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GABREP78334 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.86■□□□□ 0.45
GABREP78334 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.86■□□□□ 0.45
GABREP78334 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms