Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.9■□□□□ 0.3
VBP1P61758 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VBP1P61758 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VBP1P61758 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
VBP1P61758 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VBP1P61758 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.89■□□□□ 0.3
VBP1P61758 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.89■□□□□ 0.3
VBP1P61758 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VBP1P61758 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.89■□□□□ 0.29
VBP1P61758 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
VBP1P61758 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
VBP1P61758 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.89■□□□□ 0.29
VBP1P61758 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.89■□□□□ 0.29
VBP1P61758 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.89■□□□□ 0.29
VBP1P61758 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.89■□□□□ 0.29
VBP1P61758 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
VBP1P61758 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.89■□□□□ 0.29
VBP1P61758 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VBP1P61758 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VBP1P61758 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.88■□□□□ 0.29
VBP1P61758 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VBP1P61758 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.88■□□□□ 0.29
VBP1P61758 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.88■□□□□ 0.29
VBP1P61758 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.88■□□□□ 0.29
VBP1P61758 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
VBP1P61758 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VBP1P61758 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
VBP1P61758 AC116351.2-201ENST00000606540 1585 ntBASIC16.88■□□□□ 0.29
VBP1P61758 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.88■□□□□ 0.29
VBP1P61758 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VBP1P61758 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VBP1P61758 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.88■□□□□ 0.29
VBP1P61758 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.88■□□□□ 0.29
VBP1P61758 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.88■□□□□ 0.29
VBP1P61758 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
VBP1P61758 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VBP1P61758 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VBP1P61758 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.87■□□□□ 0.29
VBP1P61758 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
VBP1P61758 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
VBP1P61758 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.87■□□□□ 0.29
VBP1P61758 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.87■□□□□ 0.29
VBP1P61758 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VBP1P61758 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.87■□□□□ 0.29
VBP1P61758 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.87■□□□□ 0.29
VBP1P61758 MIR6084-201ENST00000622012 110 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms