Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXA3P55318 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.14□□□□□ -0.15
FOXA3P55318 SUDS3P1-201ENST00000505831 966 ntBASIC14.14□□□□□ -0.15
FOXA3P55318 AC007322.4-201ENST00000509611 723 ntBASIC14.14□□□□□ -0.15
FOXA3P55318 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXA3P55318 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXA3P55318 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FOXA3P55318 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FOXA3P55318 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
FOXA3P55318 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXA3P55318 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.14□□□□□ -0.15
FOXA3P55318 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
FOXA3P55318 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXA3P55318 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.14□□□□□ -0.15
FOXA3P55318 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXA3P55318 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
FOXA3P55318 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
FOXA3P55318 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXA3P55318 PCDHA12-202ENST00000613593 2588 ntBASIC14.13□□□□□ -0.15
FOXA3P55318 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXA3P55318 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
FOXA3P55318 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXA3P55318 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXA3P55318 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXA3P55318 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXA3P55318 AC016405.3-201ENST00000607710 860 ntBASIC14.13□□□□□ -0.15
FOXA3P55318 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXA3P55318 MYCNOS-205ENST00000641950 531 ntBASIC14.13□□□□□ -0.15
FOXA3P55318 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXA3P55318 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FOXA3P55318 TNRC18P3-201ENST00000441896 2691 ntBASIC14.13□□□□□ -0.15
FOXA3P55318 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FOXA3P55318 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA3P55318 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
FOXA3P55318 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
FOXA3P55318 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
FOXA3P55318 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXA3P55318 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
FOXA3P55318 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 AC008406.3-201ENST00000620001 1374 ntBASIC14.12□□□□□ -0.15
FOXA3P55318 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.12□□□□□ -0.15
FOXA3P55318 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
FOXA3P55318 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
FOXA3P55318 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.12□□□□□ -0.15
FOXA3P55318 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXA3P55318 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXA3P55318 AC123595.1-201ENST00000440769 1046 ntBASIC14.12□□□□□ -0.15
FOXA3P55318 UBE2DNL-204ENST00000602536 740 ntBASIC14.12□□□□□ -0.15
FOXA3P55318 AC131212.1-201ENST00000613771 668 ntBASIC14.12□□□□□ -0.15
FOXA3P55318 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms