Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDH8P55286 CR769767.2-201ENST00000622735 460 ntBASIC20.08■□□□□ 0.81
CDH8P55286 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH8P55286 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH8P55286 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.08■□□□□ 0.8
CDH8P55286 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDH8P55286 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH8P55286 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH8P55286 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH8P55286 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH8P55286 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH8P55286 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH8P55286 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CDH8P55286 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDH8P55286 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH8P55286 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDH8P55286 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH8P55286 MCCD1P1-208ENST00000445732 328 ntBASIC20.07■□□□□ 0.8
CDH8P55286 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
CDH8P55286 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH8P55286 AL138966.2-201ENST00000621997 464 ntBASIC20.07■□□□□ 0.8
CDH8P55286 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH8P55286 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH8P55286 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH8P55286 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH8P55286 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH8P55286 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH8P55286 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CDH8P55286 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH8P55286 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH8P55286 HEIH-201ENST00000623091 1652 ntBASIC20.07■□□□□ 0.8
CDH8P55286 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH8P55286 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH8P55286 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH8P55286 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CDH8P55286 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
CDH8P55286 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.06■□□□□ 0.8
CDH8P55286 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH8P55286 LIN28AP1-201ENST00000429574 405 ntBASIC20.06■□□□□ 0.8
CDH8P55286 AC036111.1-201ENST00000533973 1582 ntBASIC20.06■□□□□ 0.8
CDH8P55286 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH8P55286 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH8P55286 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.06■□□□□ 0.8
CDH8P55286 AL109659.2-201ENST00000606809 1674 ntBASIC20.06■□□□□ 0.8
CDH8P55286 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CDH8P55286 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH8P55286 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH8P55286 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH8P55286 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.05■□□□□ 0.8
CDH8P55286 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH8P55286 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDH8P55286 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.05■□□□□ 0.8
CDH8P55286 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH8P55286 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH8P55286 ATP5G1P1-201ENST00000448724 379 ntBASIC20.05■□□□□ 0.8
CDH8P55286 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH8P55286 RN7SL850P-201ENST00000579959 291 ntBASIC20.05■□□□□ 0.8
CDH8P55286 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.05■□□□□ 0.8
CDH8P55286 AC083906.6-201ENST00000641366 219 ntBASIC20.05■□□□□ 0.8
CDH8P55286 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDH8P55286 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDH8P55286 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH8P55286 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH8P55286 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDH8P55286 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH8P55286 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CDH8P55286 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 MTMR9LP-203ENST00000426597 1545 ntBASIC20.04■□□□□ 0.8
CDH8P55286 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH8P55286 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH8P55286 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH8P55286 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH8P55286 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH8P55286 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH8P55286 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH8P55286 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms