Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NR1H2P55055 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.82■□□□□ 0.44
NR1H2P55055 AP001271.2-201ENST00000624018 1556 ntBASIC17.82■□□□□ 0.44
NR1H2P55055 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NR1H2P55055 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H2P55055 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.82■□□□□ 0.44
NR1H2P55055 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 LINC00896-202ENST00000609602 2128 ntBASIC17.81■□□□□ 0.44
NR1H2P55055 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.81■□□□□ 0.44
NR1H2P55055 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
NR1H2P55055 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NR1H2P55055 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.81■□□□□ 0.44
NR1H2P55055 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NR1H2P55055 PGM5P4-201ENST00000421970 445 ntBASIC17.81■□□□□ 0.44
NR1H2P55055 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
NR1H2P55055 AC128676.1-201ENST00000454392 318 ntBASIC17.81■□□□□ 0.44
NR1H2P55055 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.81■□□□□ 0.44
NR1H2P55055 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.81■□□□□ 0.44
NR1H2P55055 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.81■□□□□ 0.44
NR1H2P55055 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NR1H2P55055 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.81■□□□□ 0.44
NR1H2P55055 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 CYP21A1P-202ENST00000354927 1481 ntBASIC17.81■□□□□ 0.44
NR1H2P55055 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H2P55055 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.81■□□□□ 0.44
NR1H2P55055 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NR1H2P55055 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.8■□□□□ 0.44
NR1H2P55055 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NR1H2P55055 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.8■□□□□ 0.44
NR1H2P55055 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NR1H2P55055 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.8■□□□□ 0.44
NR1H2P55055 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.8■□□□□ 0.44
NR1H2P55055 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.8■□□□□ 0.44
NR1H2P55055 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NR1H2P55055 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.8■□□□□ 0.44
NR1H2P55055 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NR1H2P55055 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NR1H2P55055 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H2P55055 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NR1H2P55055 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.79■□□□□ 0.44
NR1H2P55055 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NR1H2P55055 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.79■□□□□ 0.44
NR1H2P55055 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.79■□□□□ 0.44
NR1H2P55055 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NR1H2P55055 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.79■□□□□ 0.44
NR1H2P55055 GCSHP5-201ENST00000443090 522 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms