Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
ITGA8P53708 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA8P53708 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.33■□□□□ 0.69
ITGA8P53708 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA8P53708 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA8P53708 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.33■□□□□ 0.69
ITGA8P53708 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA8P53708 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA8P53708 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA8P53708 AL355802.2-201ENST00000402069 882 ntBASIC19.33■□□□□ 0.68
ITGA8P53708 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ITGA8P53708 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA8P53708 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA8P53708 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.33■□□□□ 0.68
ITGA8P53708 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.33■□□□□ 0.68
ITGA8P53708 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.33■□□□□ 0.68
ITGA8P53708 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.33■□□□□ 0.68
ITGA8P53708 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA8P53708 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA8P53708 KRT8P41-201ENST00000533985 1514 ntBASIC19.33■□□□□ 0.68
ITGA8P53708 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ITGA8P53708 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ITGA8P53708 NBPF21P-201ENST00000425093 1451 ntBASIC19.33■□□□□ 0.68
ITGA8P53708 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA8P53708 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.33■□□□□ 0.68
ITGA8P53708 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.33■□□□□ 0.68
ITGA8P53708 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ITGA8P53708 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA8P53708 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA8P53708 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ITGA8P53708 AC067852.2-201ENST00000590513 2313 ntBASIC19.33■□□□□ 0.68
ITGA8P53708 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 AC138932.1-201ENST00000534164 6830 ntBASIC19.32■□□□□ 0.68
ITGA8P53708 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGA8P53708 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 RCC2P6-201ENST00000526625 1557 ntBASIC19.32■□□□□ 0.68
ITGA8P53708 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGA8P53708 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
ITGA8P53708 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ITGA8P53708 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
ITGA8P53708 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ITGA8P53708 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 POM121L13P-201ENST00000422362 380 ntBASIC19.32■□□□□ 0.68
ITGA8P53708 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGA8P53708 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGA8P53708 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.32■□□□□ 0.68
ITGA8P53708 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.32■□□□□ 0.68
ITGA8P53708 PRKY-204ENST00000533551 1019 ntBASIC19.32■□□□□ 0.68
ITGA8P53708 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.32■□□□□ 0.68
ITGA8P53708 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.32■□□□□ 0.68
ITGA8P53708 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ITGA8P53708 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
ITGA8P53708 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ITGA8P53708 AL162741.1-201ENST00000565563 1558 ntBASIC19.32■□□□□ 0.68
ITGA8P53708 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGA8P53708 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.31■□□□□ 0.68
ITGA8P53708 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ITGA8P53708 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ITGA8P53708 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ITGA8P53708 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGA8P53708 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.31■□□□□ 0.68
ITGA8P53708 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGA8P53708 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGA8P53708 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.31■□□□□ 0.68
ITGA8P53708 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.31■□□□□ 0.68
ITGA8P53708 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITGA8P53708 MTMR9LP-203ENST00000426597 1545 ntBASIC19.3■□□□□ 0.68
ITGA8P53708 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ITGA8P53708 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.3■□□□□ 0.68
ITGA8P53708 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
ITGA8P53708 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ITGA8P53708 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITGA8P53708 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.3■□□□□ 0.68
ITGA8P53708 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ITGA8P53708 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms