Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.63■□□□□ 0.41
EFNA3P52797 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 RNF152P1-201ENST00000397754 604 ntBASIC17.63■□□□□ 0.41
EFNA3P52797 TSPY5P-201ENST00000426936 936 ntBASIC17.63■□□□□ 0.41
EFNA3P52797 AL590326.2-201ENST00000625139 305 ntBASIC17.63■□□□□ 0.41
EFNA3P52797 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
EFNA3P52797 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
EFNA3P52797 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
EFNA3P52797 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EFNA3P52797 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EFNA3P52797 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EFNA3P52797 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
EFNA3P52797 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.63■□□□□ 0.41
EFNA3P52797 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 RCC2P3-201ENST00000418112 1537 ntBASIC17.62■□□□□ 0.41
EFNA3P52797 AC008556.1-201ENST00000610908 2040 ntBASIC17.62■□□□□ 0.41
EFNA3P52797 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.62■□□□□ 0.41
EFNA3P52797 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 FAM8A6P-201ENST00000407496 1135 ntBASIC17.62■□□□□ 0.41
EFNA3P52797 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.62■□□□□ 0.41
EFNA3P52797 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.62■□□□□ 0.41
EFNA3P52797 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.62■□□□□ 0.41
EFNA3P52797 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.62■□□□□ 0.41
EFNA3P52797 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.62■□□□□ 0.41
EFNA3P52797 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.62■□□□□ 0.41
EFNA3P52797 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.62■□□□□ 0.41
EFNA3P52797 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
EFNA3P52797 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
EFNA3P52797 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
EFNA3P52797 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.62■□□□□ 0.41
EFNA3P52797 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.62■□□□□ 0.41
EFNA3P52797 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EFNA3P52797 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.61■□□□□ 0.41
EFNA3P52797 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.61■□□□□ 0.41
EFNA3P52797 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.61■□□□□ 0.41
EFNA3P52797 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNA3P52797 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
EFNA3P52797 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.61■□□□□ 0.41
EFNA3P52797 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNA3P52797 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.61■□□□□ 0.41
EFNA3P52797 GCSHP2-201ENST00000560971 527 ntBASIC17.61■□□□□ 0.41
EFNA3P52797 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFNA3P52797 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EFNA3P52797 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.61■□□□□ 0.41
EFNA3P52797 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNA3P52797 KRT8P32-201ENST00000512863 1461 ntBASIC17.61■□□□□ 0.41
EFNA3P52797 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.61■□□□□ 0.41
EFNA3P52797 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.61■□□□□ 0.41
EFNA3P52797 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNA3P52797 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EFNA3P52797 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNA3P52797 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNA3P52797 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EFNA3P52797 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EFNA3P52797 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.61■□□□□ 0.41
EFNA3P52797 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.61■□□□□ 0.41
EFNA3P52797 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EFNA3P52797 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
EFNA3P52797 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
EFNA3P52797 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EFNA3P52797 MCCD1P1-208ENST00000445732 328 ntBASIC17.6■□□□□ 0.41
EFNA3P52797 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.6■□□□□ 0.41
EFNA3P52797 AL512604.3-201ENST00000569583 964 ntBASIC17.6■□□□□ 0.41
EFNA3P52797 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.6■□□□□ 0.41
EFNA3P52797 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EFNA3P52797 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.6■□□□□ 0.41
EFNA3P52797 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.6■□□□□ 0.41
EFNA3P52797 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
EFNA3P52797 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
EFNA3P52797 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.6■□□□□ 0.41
EFNA3P52797 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
EFNA3P52797 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.6■□□□□ 0.41
EFNA3P52797 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms