Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 AL162741.1-201ENST00000565563 1558 ntBASIC18.03■□□□□ 0.48
POLR2JP52435 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR2JP52435 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR2JP52435 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
POLR2JP52435 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
POLR2JP52435 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.02■□□□□ 0.48
POLR2JP52435 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.02■□□□□ 0.48
POLR2JP52435 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR2JP52435 NBPF21P-201ENST00000425093 1451 ntBASIC18.02■□□□□ 0.48
POLR2JP52435 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
POLR2JP52435 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.02■□□□□ 0.48
POLR2JP52435 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR2JP52435 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.02■□□□□ 0.48
POLR2JP52435 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.02■□□□□ 0.48
POLR2JP52435 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.02■□□□□ 0.48
POLR2JP52435 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
POLR2JP52435 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.02■□□□□ 0.48
POLR2JP52435 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.02■□□□□ 0.48
POLR2JP52435 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.02■□□□□ 0.48
POLR2JP52435 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR2JP52435 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.02■□□□□ 0.48
POLR2JP52435 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.02■□□□□ 0.47
POLR2JP52435 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR2JP52435 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.02■□□□□ 0.47
POLR2JP52435 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR2JP52435 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.02■□□□□ 0.47
POLR2JP52435 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR2JP52435 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
POLR2JP52435 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 RCC2P6-201ENST00000526625 1557 ntBASIC18.01■□□□□ 0.47
POLR2JP52435 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.01■□□□□ 0.47
POLR2JP52435 POM121L13P-201ENST00000422362 380 ntBASIC18.01■□□□□ 0.47
POLR2JP52435 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.01■□□□□ 0.47
POLR2JP52435 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
POLR2JP52435 BCL2-203ENST00000589955 5011 ntBASIC18.01■□□□□ 0.47
POLR2JP52435 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
POLR2JP52435 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR2JP52435 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
POLR2JP52435 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
POLR2JP52435 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18■□□□□ 0.47
POLR2JP52435 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18■□□□□ 0.47
POLR2JP52435 KRT8P41-201ENST00000533985 1514 ntBASIC18■□□□□ 0.47
POLR2JP52435 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
POLR2JP52435 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms