Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.59■□□□□ 0.25
CCR9P51686 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.59■□□□□ 0.25
CCR9P51686 AC083880.1-201ENST00000608266 535 ntBASIC16.59■□□□□ 0.25
CCR9P51686 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCR9P51686 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCR9P51686 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.59■□□□□ 0.25
CCR9P51686 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.59■□□□□ 0.25
CCR9P51686 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCR9P51686 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
CCR9P51686 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CCR9P51686 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCR9P51686 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCR9P51686 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.58■□□□□ 0.25
CCR9P51686 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.58■□□□□ 0.24
CCR9P51686 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.58■□□□□ 0.24
CCR9P51686 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.58■□□□□ 0.24
CCR9P51686 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.58■□□□□ 0.24
CCR9P51686 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.58■□□□□ 0.24
CCR9P51686 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.58■□□□□ 0.24
CCR9P51686 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.58■□□□□ 0.24
CCR9P51686 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.58■□□□□ 0.24
CCR9P51686 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.58■□□□□ 0.24
CCR9P51686 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.58■□□□□ 0.24
CCR9P51686 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.58■□□□□ 0.24
CCR9P51686 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.58■□□□□ 0.24
CCR9P51686 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CCR9P51686 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCR9P51686 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.57■□□□□ 0.24
CCR9P51686 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CCR9P51686 AL162741.1-201ENST00000565563 1558 ntBASIC16.57■□□□□ 0.24
CCR9P51686 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.57■□□□□ 0.24
CCR9P51686 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.57■□□□□ 0.24
CCR9P51686 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 PRKY-204ENST00000533551 1019 ntBASIC16.57■□□□□ 0.24
CCR9P51686 C1QL1P1-201ENST00000568105 661 ntBASIC16.57■□□□□ 0.24
CCR9P51686 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.57■□□□□ 0.24
CCR9P51686 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.57■□□□□ 0.24
CCR9P51686 HLA-A-209ENST00000638375 975 ntBASIC16.57■□□□□ 0.24
CCR9P51686 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCR9P51686 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCR9P51686 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.57■□□□□ 0.24
CCR9P51686 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCR9P51686 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.56■□□□□ 0.24
CCR9P51686 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCR9P51686 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCR9P51686 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms