Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 AL353807.1-201ENST00000427475 662 ntBASIC16.42■□□□□ 0.22
GSK3AP49840 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 KSR1P1-201ENST00000446298 240 ntBASIC16.42■□□□□ 0.22
GSK3AP49840 RPS2P4-201ENST00000476944 856 ntBASIC16.42■□□□□ 0.22
GSK3AP49840 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
GSK3AP49840 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.42■□□□□ 0.22
GSK3AP49840 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.42■□□□□ 0.22
GSK3AP49840 FAM197Y4-202ENST00000622692 608 ntBASIC16.42■□□□□ 0.22
GSK3AP49840 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.42■□□□□ 0.22
GSK3AP49840 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.42■□□□□ 0.22
GSK3AP49840 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.42■□□□□ 0.22
GSK3AP49840 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSK3AP49840 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.41■□□□□ 0.22
GSK3AP49840 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 AC104581.1-202ENST00000635932 2618 ntBASIC16.41■□□□□ 0.22
GSK3AP49840 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GSK3AP49840 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GSK3AP49840 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 AL512353.2-201ENST00000448759 1962 ntBASIC16.41■□□□□ 0.22
GSK3AP49840 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
GSK3AP49840 AC004980.1-204ENST00000429707 299 ntBASIC16.41■□□□□ 0.22
GSK3AP49840 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.41■□□□□ 0.22
GSK3AP49840 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
GSK3AP49840 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.41■□□□□ 0.22
GSK3AP49840 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.41■□□□□ 0.22
GSK3AP49840 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.41■□□□□ 0.22
GSK3AP49840 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.41■□□□□ 0.22
GSK3AP49840 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GSK3AP49840 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
GSK3AP49840 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSK3AP49840 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
GSK3AP49840 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
GSK3AP49840 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.4■□□□□ 0.22
GSK3AP49840 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.4■□□□□ 0.22
GSK3AP49840 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.4■□□□□ 0.22
GSK3AP49840 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GSK3AP49840 AL359736.2-201ENST00000621992 437 ntBASIC16.4■□□□□ 0.22
GSK3AP49840 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.4■□□□□ 0.22
GSK3AP49840 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.4■□□□□ 0.22
GSK3AP49840 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 LTB4R2-202ENST00000528054 3092 ntBASIC16.4■□□□□ 0.22
GSK3AP49840 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GSK3AP49840 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GSK3AP49840 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
GSK3AP49840 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GSK3AP49840 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GSK3AP49840 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.39■□□□□ 0.21
GSK3AP49840 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.39■□□□□ 0.21
GSK3AP49840 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GSK3AP49840 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GSK3AP49840 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GSK3AP49840 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms