Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP13P45452 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP13P45452 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP13P45452 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.58■□□□□ 0.73
MMP13P45452 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.58■□□□□ 0.73
MMP13P45452 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.58■□□□□ 0.73
MMP13P45452 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP13P45452 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.58■□□□□ 0.73
MMP13P45452 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MMP13P45452 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP13P45452 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.58■□□□□ 0.73
MMP13P45452 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP13P45452 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.58■□□□□ 0.73
MMP13P45452 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.58■□□□□ 0.73
MMP13P45452 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.58■□□□□ 0.73
MMP13P45452 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
MMP13P45452 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.58■□□□□ 0.73
MMP13P45452 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP13P45452 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
MMP13P45452 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP13P45452 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.58■□□□□ 0.72
MMP13P45452 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 Z85996.1-201ENST00000494644 937 ntBASIC19.58■□□□□ 0.72
MMP13P45452 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.58■□□□□ 0.72
MMP13P45452 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 AC113410.3-201ENST00000623366 203 ntBASIC19.58■□□□□ 0.72
MMP13P45452 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.58■□□□□ 0.72
MMP13P45452 AL031985.4-201ENST00000642138 673 ntBASIC19.58■□□□□ 0.72
MMP13P45452 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.58■□□□□ 0.72
MMP13P45452 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP13P45452 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP13P45452 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP13P45452 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP13P45452 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP13P45452 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MMP13P45452 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MMP13P45452 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MMP13P45452 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP13P45452 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP13P45452 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP13P45452 AC026271.3-201ENST00000571884 352 ntBASIC19.57■□□□□ 0.72
MMP13P45452 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP13P45452 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.57■□□□□ 0.72
MMP13P45452 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MMP13P45452 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MMP13P45452 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.57■□□□□ 0.72
MMP13P45452 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP13P45452 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MMP13P45452 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP13P45452 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP13P45452 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.56■□□□□ 0.72
MMP13P45452 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
MMP13P45452 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP13P45452 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP13P45452 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MMP13P45452 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MMP13P45452 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP13P45452 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
MMP13P45452 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MMP13P45452 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MMP13P45452 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.56■□□□□ 0.72
MMP13P45452 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms