Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ST3GAL3-231ENST00000530581 893 ntTSL 1 (best)10.73□□□□□ -0.697e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-203ENST00000332628 1035 ntTSL 1 (best) BASIC10.6□□□□□ -0.717e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-216ENST00000372368 1290 ntTSL 1 (best) BASIC10.57□□□□□ -0.727e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-234ENST00000531993 786 ntTSL 1 (best) BASIC10.4□□□□□ -0.747e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-214ENST00000372366 670 ntTSL 1 (best) BASIC10.22□□□□□ -0.777e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-218ENST00000372372 1242 ntTSL 1 (best) BASIC10.19□□□□□ -0.787e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-238ENST00000533997 1007 ntTSL 1 (best)10.19□□□□□ -0.787e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-222ENST00000469715 1160 ntTSL 1 (best)9.98□□□□□ -0.817e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-236ENST00000533212 781 ntTSL 1 (best)9.98□□□□□ -0.817e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-227ENST00000490541 976 ntTSL 1 (best)9.98□□□□□ -0.817e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC9.72□□□□□ -0.857e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC9.27□□□□□ -0.937e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC8.43□□□□□ -1.067e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-221ENST00000461375 806 ntTSL 57.58□□□□□ -1.27e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.17□□□□□ -1.267e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.17□□□□□ -1.267e-7■■■□□ 18.5
MATR3P43243 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.9□□□□□ -1.467e-7■■■□□ 18.5
MATR3P43243 MAP4K4-211ENST00000427603 526 ntTSL 410.58□□□□□ -0.728e-7■■■□□ 18.5
MATR3P43243 MARK3-219ENST00000559328 533 ntTSL 422.47■■□□□ 1.193e-11■■■□□ 18.5
MATR3P43243 MARK3-221ENST00000560603 572 ntTSL 413.13□□□□□ -0.313e-11■■■□□ 18.5
MATR3P43243 MARK3-225ENST00000561225 523 ntTSL 58.36□□□□□ -1.073e-11■■■□□ 18.5
MATR3P43243 AL163953.1-201ENST00000436530 726 ntTSL 3 BASIC11.58□□□□□ -0.563e-9■■■□□ 18.5
MATR3P43243 XIST-205ENST00000433732 676 ntTSL 24.06□□□□□ -1.765e-19■■■□□ 18.5
MATR3P43243 USP15-210ENST00000548836 579 ntTSL 34.39□□□□□ -1.714e-7■■■□□ 18.5
MATR3P43243 PARP12-205ENST00000473341 2861 ntTSL 1 (best)21.36■■□□□ 1.012e-6■■■□□ 18.5
MATR3P43243 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.762e-6■■■□□ 18.5
MATR3P43243 PARP12-209ENST00000489809 915 ntTSL 314.95□□□□□ -0.022e-6■■■□□ 18.5
MATR3P43243 PARP12-207ENST00000488726 2574 ntTSL 512.9□□□□□ -0.342e-6■■■□□ 18.5
MATR3P43243 PARP12-210ENST00000491598 874 ntTSL 312.87□□□□□ -0.352e-6■■■□□ 18.5
MATR3P43243 KLK1-203ENST00000593859 992 ntTSL 218.76■□□□□ 0.595e-13■■■□□ 18.5
MATR3P43243 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.195e-13■■■□□ 18.5
MATR3P43243 KLK1-204ENST00000596300 912 ntTSL 215.64■□□□□ 0.095e-13■■■□□ 18.5
MATR3P43243 KLK1-202ENST00000593325 1854 ntTSL 215.22■□□□□ 0.035e-13■■■□□ 18.5
MATR3P43243 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.88■■□□□ 1.251e-6■■■□□ 18.5
MATR3P43243 EIPR1-203ENST00000406835 738 ntTSL 520.77■□□□□ 0.921e-6■■■□□ 18.5
MATR3P43243 EIPR1-204ENST00000435721 672 ntTSL 320.77■□□□□ 0.921e-6■■■□□ 18.5
MATR3P43243 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.741e-6■■■□□ 18.5
MATR3P43243 EIPR1-205ENST00000441271 647 ntTSL 518.79■□□□□ 0.61e-6■■■□□ 18.5
MATR3P43243 EIPR1-207ENST00000444776 594 ntTSL 418.7■□□□□ 0.581e-6■■■□□ 18.5
MATR3P43243 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.04■□□□□ 0.481e-6■■■□□ 18.5
MATR3P43243 EIPR1-208ENST00000455162 847 ntTSL 511.5□□□□□ -0.571e-6■■■□□ 18.5
MATR3P43243 EIPR1-210ENST00000463662 757 ntTSL 39.8□□□□□ -0.841e-6■■■□□ 18.5
MATR3P43243 PDIA5-205ENST00000484644 667 ntTSL 526.08■■□□□ 1.772e-6■■■□□ 18.5
MATR3P43243 MAP4K3-204ENST00000429397 689 ntTSL 326.43■■□□□ 1.826e-7■■■□□ 18.5
MATR3P43243 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.2■□□□□ 0.666e-7■■■□□ 18.5
MATR3P43243 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.666e-7■■■□□ 18.5
MATR3P43243 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.066e-7■■■□□ 18.5
MATR3P43243 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.026e-7■■■□□ 18.5
MATR3P43243 SLC39A11-213ENST00000582769 567 ntTSL 513.9□□□□□ -0.186e-7■■■□□ 18.5
MATR3P43243 SLC39A11-206ENST00000579491 692 ntTSL 313.9□□□□□ -0.186e-7■■■□□ 18.5
MATR3P43243 SLC39A11-217ENST00000584129 747 ntTSL 311.93□□□□□ -0.56e-7■■■□□ 18.5
MATR3P43243 TAF4-206ENST00000608458 2147 ntTSL 219.21■□□□□ 0.674e-6■■■□□ 18.5
MATR3P43243 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC10.64□□□□□ -0.712e-6■■■□□ 18.5
MATR3P43243 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.82e-6■■■□□ 18.5
MATR3P43243 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.79□□□□□ -12e-6■■■□□ 18.5
MATR3P43243 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.18□□□□□ -1.263e-8■■■□□ 18.5
MATR3P43243 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.821e-6■■■□□ 18.5
MATR3P43243 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.66□□□□□ -1.821e-6■■■□□ 18.5
MATR3P43243 LMAN2L-206ENST00000446780 1400 ntTSL 216.77■□□□□ 0.274e-6■■■□□ 18.5
MATR3P43243 LMAN2L-204ENST00000434865 1163 ntTSL 216.57■□□□□ 0.244e-6■■■□□ 18.5
MATR3P43243 LMAN2L-205ENST00000440610 1008 ntTSL 216.19■□□□□ 0.184e-6■■■□□ 18.5
MATR3P43243 LMAN2L-207ENST00000449221 1061 ntTSL 216.19■□□□□ 0.184e-6■■■□□ 18.5
MATR3P43243 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.184e-6■■■□□ 18.5
MATR3P43243 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.054e-6■■■□□ 18.5
MATR3P43243 LMAN2L-203ENST00000434524 2410 ntTSL 513.72□□□□□ -0.214e-6■■■□□ 18.5
MATR3P43243 OR51K1P-201ENST00000510214 950 ntBASIC4.79□□□□□ -1.648e-8■■■□□ 18.5
MATR3P43243 LINC01029-203ENST00000582805 788 ntTSL 1 (best)15.89■□□□□ 0.135e-8■■■□□ 18.5
MATR3P43243 TRIO-218ENST00000512070 8907 ntTSL 216.78■□□□□ 0.281e-6■■■□□ 18.5
MATR3P43243 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.091e-6■■■□□ 18.5
MATR3P43243 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.673e-7■■■□□ 18.5
MATR3P43243 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.733e-7■■■□□ 18.5
MATR3P43243 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.282e-6■■■□□ 18.5
MATR3P43243 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.743e-6■■■□□ 18.5
MATR3P43243 AMFR-202ENST00000492830 2249 ntTSL 214.59□□□□□ -0.073e-6■■■□□ 18.5
MATR3P43243 AMFR-209ENST00000567738 866 ntAPPRIS ALT2 TSL 510.72□□□□□ -0.693e-6■■■□□ 18.5
MATR3P43243 AMFR-207ENST00000566334 426 ntTSL 210.13□□□□□ -0.793e-6■■■□□ 18.5
MATR3P43243 STK39-203ENST00000487143 2214 ntTSL 1 (best)7.17□□□□□ -1.262e-6■■■□□ 18.5
MATR3P43243 SND1-213ENST00000486037 695 ntTSL 310.44□□□□□ -0.742e-6■■■□□ 18.5
MATR3P43243 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.072e-7■■■□□ 18.4
MATR3P43243 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.992e-7■■■□□ 18.4
MATR3P43243 PPFIA1-222ENST00000532504 5159 ntTSL 1 (best)18.29■□□□□ 0.522e-7■■■□□ 18.4
MATR3P43243 CTNNA1-230ENST00000521724 2741 ntTSL 210.73□□□□□ -0.696e-7■■■□□ 18.4
MATR3P43243 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC9.35□□□□□ -0.916e-7■■■□□ 18.4
MATR3P43243 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.056e-7■■■□□ 18.4
MATR3P43243 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.9□□□□□ -1.146e-7■■■□□ 18.4
MATR3P43243 FTX-207ENST00000602576 574 ntTSL 413.41□□□□□ -0.264e-32■■■□□ 18.4
MATR3P43243 FTX-208ENST00000602776 561 ntTSL 45.05□□□□□ -1.64e-32■■■□□ 18.4
MATR3P43243 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.351e-13■■■□□ 18.4
MATR3P43243 PAH-208ENST00000549247 961 ntTSL 26.9□□□□□ -1.31e-9■■■□□ 18.4
MATR3P43243 PAH-216ENST00000635477 429 ntTSL 54.76□□□□□ -1.651e-9■■■□□ 18.4
MATR3P43243 PAH-211ENST00000551114 1109 ntTSL 24.76□□□□□ -1.651e-9■■■□□ 18.4
MATR3P43243 DCBLD2-205ENST00000469648 584 ntTSL 37.44□□□□□ -1.223e-6■■■□□ 18.4
MATR3P43243 DCBLD2-208ENST00000486004 582 ntTSL 34.33□□□□□ -1.723e-6■■■□□ 18.4
MATR3P43243 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.49■□□□□ 0.072e-6■■■□□ 18.4
MATR3P43243 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 02e-6■■■□□ 18.4
MATR3P43243 SLC25A26-205ENST00000483224 1840 ntTSL 512.5□□□□□ -0.412e-6■■■□□ 18.4
MATR3P43243 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC10.08□□□□□ -0.82e-6■■■□□ 18.4
MATR3P43243 SLC25A26-204ENST00000464350 3879 ntTSL 1 (best)9.81□□□□□ -0.842e-6■■■□□ 18.4
MATR3P43243 SLC25A26-206ENST00000484768 375 ntTSL 39.32□□□□□ -0.922e-6■■■□□ 18.4
MATR3P43243 TULP4-206ENST00000616856 2307 ntTSL 213.38□□□□□ -0.273e-6■■■□□ 18.4
Retrieved 100 of 16,209 protein–RNA pairs in 162.1 ms