Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.39■□□□□ 0.21
GDNFP39905 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.39■□□□□ 0.21
GDNFP39905 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.39■□□□□ 0.21
GDNFP39905 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.39■□□□□ 0.21
GDNFP39905 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GDNFP39905 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.39■□□□□ 0.21
GDNFP39905 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.39■□□□□ 0.21
GDNFP39905 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.38■□□□□ 0.21
GDNFP39905 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GDNFP39905 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GDNFP39905 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.38■□□□□ 0.21
GDNFP39905 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
GDNFP39905 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
GDNFP39905 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.38■□□□□ 0.21
GDNFP39905 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.38■□□□□ 0.21
GDNFP39905 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 AC018553.1-201ENST00000616682 1458 ntBASIC16.38■□□□□ 0.21
GDNFP39905 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.38■□□□□ 0.21
GDNFP39905 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
GDNFP39905 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.38■□□□□ 0.21
GDNFP39905 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.38■□□□□ 0.21
GDNFP39905 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.38■□□□□ 0.21
GDNFP39905 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.38■□□□□ 0.21
GDNFP39905 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
GDNFP39905 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
GDNFP39905 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.38■□□□□ 0.21
GDNFP39905 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GDNFP39905 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
GDNFP39905 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GDNFP39905 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
GDNFP39905 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
GDNFP39905 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.37■□□□□ 0.21
GDNFP39905 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.37■□□□□ 0.21
GDNFP39905 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GDNFP39905 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
GDNFP39905 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.37■□□□□ 0.21
GDNFP39905 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 ESPNP-201ENST00000270691 2015 ntBASIC16.37■□□□□ 0.21
GDNFP39905 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
GDNFP39905 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.37■□□□□ 0.21
GDNFP39905 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GDNFP39905 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.37■□□□□ 0.21
GDNFP39905 AC133041.1-202ENST00000642053 222 ntBASIC16.37■□□□□ 0.21
GDNFP39905 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.37■□□□□ 0.21
GDNFP39905 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
GDNFP39905 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GDNFP39905 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
GDNFP39905 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.37■□□□□ 0.21
GDNFP39905 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
GDNFP39905 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.36■□□□□ 0.21
GDNFP39905 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDNFP39905 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
GDNFP39905 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDNFP39905 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
GDNFP39905 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDNFP39905 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.36■□□□□ 0.21
GDNFP39905 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDNFP39905 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.36■□□□□ 0.21
GDNFP39905 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
GDNFP39905 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
GDNFP39905 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.36■□□□□ 0.21
GDNFP39905 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GDNFP39905 AC073210.2-201ENST00000430369 194 ntBASIC16.36■□□□□ 0.21
GDNFP39905 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.36■□□□□ 0.21
GDNFP39905 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GDNFP39905 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.36■□□□□ 0.21
GDNFP39905 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GDNFP39905 AC006557.6-201ENST00000623071 864 ntBASIC16.36■□□□□ 0.21
GDNFP39905 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GDNFP39905 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms