Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE6BP35913 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDE6BP35913 NSUN5P1-202ENST00000421140 1535 ntBASIC23.18■■□□□ 1.3
PDE6BP35913 NSUN5P2-203ENST00000457352 1529 ntBASIC23.18■■□□□ 1.3
PDE6BP35913 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDE6BP35913 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDE6BP35913 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDE6BP35913 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDE6BP35913 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PDE6BP35913 AF238378.1-201ENST00000526806 358 ntBASIC23.18■■□□□ 1.3
PDE6BP35913 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.18■■□□□ 1.3
PDE6BP35913 AC139530.3-201ENST00000620344 690 ntBASIC23.18■■□□□ 1.3
PDE6BP35913 AF228730.7-201ENST00000641842 219 ntBASIC23.18■■□□□ 1.3
PDE6BP35913 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDE6BP35913 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PDE6BP35913 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PDE6BP35913 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PDE6BP35913 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
PDE6BP35913 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.17■■□□□ 1.3
PDE6BP35913 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.17■■□□□ 1.3
PDE6BP35913 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.17■■□□□ 1.3
PDE6BP35913 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.17■■□□□ 1.3
PDE6BP35913 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.17■■□□□ 1.3
PDE6BP35913 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 AP001005.1-201ENST00000571755 1248 ntBASIC23.17■■□□□ 1.3
PDE6BP35913 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.17■■□□□ 1.3
PDE6BP35913 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.17■■□□□ 1.3
PDE6BP35913 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.17■■□□□ 1.3
PDE6BP35913 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PDE6BP35913 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PDE6BP35913 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDE6BP35913 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE6BP35913 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE6BP35913 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.16■■□□□ 1.3
PDE6BP35913 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.16■■□□□ 1.3
PDE6BP35913 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PDE6BP35913 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.16■■□□□ 1.3
PDE6BP35913 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE6BP35913 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDE6BP35913 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE6BP35913 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PDE6BP35913 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE6BP35913 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE6BP35913 MIR574-201ENST00000385209 96 ntBASIC23.16■■□□□ 1.3
PDE6BP35913 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.16■■□□□ 1.3
PDE6BP35913 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.16■■□□□ 1.3
PDE6BP35913 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PDE6BP35913 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.16■■□□□ 1.3
PDE6BP35913 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.16■■□□□ 1.3
PDE6BP35913 AC024563.2-201ENST00000603282 481 ntBASIC23.16■■□□□ 1.3
PDE6BP35913 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.16■■□□□ 1.3
PDE6BP35913 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PDE6BP35913 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.16■■□□□ 1.3
PDE6BP35913 TCF3P1-201ENST00000423021 1937 ntBASIC23.16■■□□□ 1.3
PDE6BP35913 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.15■■□□□ 1.3
PDE6BP35913 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE6BP35913 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE6BP35913 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE6BP35913 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE6BP35913 NUS1P2-201ENST00000417358 873 ntBASIC23.15■■□□□ 1.3
PDE6BP35913 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.15■■□□□ 1.3
PDE6BP35913 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.15■■□□□ 1.3
PDE6BP35913 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.15■■□□□ 1.3
PDE6BP35913 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE6BP35913 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE6BP35913 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE6BP35913 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDE6BP35913 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.15■■□□□ 1.3
PDE6BP35913 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE6BP35913 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.14■■□□□ 1.3
PDE6BP35913 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDE6BP35913 IL9RP2-201ENST00000423948 1312 ntBASIC23.14■■□□□ 1.3
PDE6BP35913 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDE6BP35913 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDE6BP35913 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.14■■□□□ 1.3
PDE6BP35913 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDE6BP35913 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 KRT18P13-201ENST00000400056 1290 ntBASIC23.14■■□□□ 1.29
PDE6BP35913 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PDE6BP35913 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.14■■□□□ 1.29
PDE6BP35913 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.14■■□□□ 1.29
PDE6BP35913 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDE6BP35913 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PDE6BP35913 RNA5SP419-201ENST00000515908 135 ntBASIC23.14■■□□□ 1.29
PDE6BP35913 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.14■■□□□ 1.29
PDE6BP35913 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.14■■□□□ 1.29
PDE6BP35913 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms