Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COPB2P35606 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.5■■□□□ 1.03
COPB2P35606 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPB2P35606 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.5■■□□□ 1.03
COPB2P35606 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.49■■□□□ 1.03
COPB2P35606 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.49■■□□□ 1.03
COPB2P35606 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.49■■□□□ 1.03
COPB2P35606 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.49■■□□□ 1.03
COPB2P35606 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.49■■□□□ 1.03
COPB2P35606 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.49■■□□□ 1.03
COPB2P35606 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.49■■□□□ 1.03
COPB2P35606 KRT8P26-201ENST00000534154 1276 ntBASIC21.49■■□□□ 1.03
COPB2P35606 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.49■■□□□ 1.03
COPB2P35606 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.49■■□□□ 1.03
COPB2P35606 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.49■■□□□ 1.03
COPB2P35606 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.49■■□□□ 1.03
COPB2P35606 MIR3652-201ENST00000579335 131 ntBASIC21.49■■□□□ 1.03
COPB2P35606 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.49■■□□□ 1.03
COPB2P35606 AC092119.3-201ENST00000612618 583 ntBASIC21.49■■□□□ 1.03
COPB2P35606 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.49■■□□□ 1.03
COPB2P35606 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COPB2P35606 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.49■■□□□ 1.03
COPB2P35606 AC007952.6-201ENST00000573168 2673 ntBASIC21.49■■□□□ 1.03
COPB2P35606 AC003957.1-201ENST00000625108 2673 ntBASIC21.49■■□□□ 1.03
COPB2P35606 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COPB2P35606 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.48■■□□□ 1.03
COPB2P35606 AL162741.1-201ENST00000565563 1558 ntBASIC21.48■■□□□ 1.03
COPB2P35606 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 AL512353.2-201ENST00000448759 1962 ntBASIC21.48■■□□□ 1.03
COPB2P35606 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.48■■□□□ 1.03
COPB2P35606 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COPB2P35606 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
COPB2P35606 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
COPB2P35606 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
COPB2P35606 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.48■■□□□ 1.03
COPB2P35606 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.48■■□□□ 1.03
COPB2P35606 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.48■■□□□ 1.03
COPB2P35606 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 MIR662-201ENST00000384847 95 ntBASIC21.48■■□□□ 1.03
COPB2P35606 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
COPB2P35606 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.48■■□□□ 1.03
COPB2P35606 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.48■■□□□ 1.03
COPB2P35606 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.48■■□□□ 1.03
COPB2P35606 RCC2P3-201ENST00000418112 1537 ntBASIC21.48■■□□□ 1.03
COPB2P35606 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPB2P35606 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COPB2P35606 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
COPB2P35606 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPB2P35606 TEX21P-204ENST00000641479 1693 ntBASIC21.47■■□□□ 1.03
COPB2P35606 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPB2P35606 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COPB2P35606 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COPB2P35606 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.47■■□□□ 1.03
COPB2P35606 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPB2P35606 KRT18P23-201ENST00000435622 1283 ntBASIC21.47■■□□□ 1.03
COPB2P35606 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.47■■□□□ 1.03
COPB2P35606 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.47■■□□□ 1.03
COPB2P35606 AC079602.3-201ENST00000623931 403 ntBASIC21.47■■□□□ 1.03
COPB2P35606 AL391807.1-203ENST00000604392 2365 ntBASIC21.47■■□□□ 1.03
COPB2P35606 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COPB2P35606 AC016734.2-201ENST00000624325 1377 ntBASIC21.47■■□□□ 1.03
COPB2P35606 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.47■■□□□ 1.03
COPB2P35606 TREX1-205ENST00000625293 1783 ntBASIC21.46■■□□□ 1.03
COPB2P35606 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPB2P35606 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPB2P35606 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPB2P35606 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.46■■□□□ 1.03
COPB2P35606 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPB2P35606 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.46■■□□□ 1.03
COPB2P35606 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.46■■□□□ 1.03
COPB2P35606 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPB2P35606 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.46■■□□□ 1.03
COPB2P35606 AC104390.1-201ENST00000555663 520 ntBASIC21.46■■□□□ 1.03
COPB2P35606 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.46■■□□□ 1.03
COPB2P35606 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
COPB2P35606 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.46■■□□□ 1.03
COPB2P35606 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.46■■□□□ 1.03
COPB2P35606 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPB2P35606 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.46■■□□□ 1.03
COPB2P35606 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COPB2P35606 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
COPB2P35606 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms