Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASP1P29466 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CASP1P29466 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP1P29466 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP1P29466 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CASP1P29466 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CASP1P29466 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.05■□□□□ 0.96
CASP1P29466 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 PRSS44-201ENST00000515154 1146 ntBASIC21.05■□□□□ 0.96
CASP1P29466 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 AC026271.3-201ENST00000571884 352 ntBASIC21.05■□□□□ 0.96
CASP1P29466 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.05■□□□□ 0.96
CASP1P29466 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.05■□□□□ 0.96
CASP1P29466 AC113410.3-201ENST00000623366 203 ntBASIC21.05■□□□□ 0.96
CASP1P29466 AC068587.9-201ENST00000641814 219 ntBASIC21.05■□□□□ 0.96
CASP1P29466 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 AC018470.1-201ENST00000624790 3129 ntBASIC21.05■□□□□ 0.96
CASP1P29466 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.05■□□□□ 0.96
CASP1P29466 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.05■□□□□ 0.96
CASP1P29466 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CASP1P29466 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CASP1P29466 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CASP1P29466 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.04■□□□□ 0.96
CASP1P29466 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.04■□□□□ 0.96
CASP1P29466 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.04■□□□□ 0.96
CASP1P29466 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CASP1P29466 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CASP1P29466 RPS2P55-201ENST00000397318 883 ntBASIC21.04■□□□□ 0.96
CASP1P29466 FAM207BP-201ENST00000447172 505 ntBASIC21.04■□□□□ 0.96
CASP1P29466 AC107956.1-201ENST00000494359 873 ntBASIC21.04■□□□□ 0.96
CASP1P29466 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.04■□□□□ 0.96
CASP1P29466 CKBP1-201ENST00000565489 1086 ntBASIC21.04■□□□□ 0.96
CASP1P29466 Z99916.2-201ENST00000604037 246 ntBASIC21.04■□□□□ 0.96
CASP1P29466 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CASP1P29466 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CASP1P29466 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP1P29466 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASP1P29466 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CASP1P29466 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.03■□□□□ 0.96
CASP1P29466 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.03■□□□□ 0.96
CASP1P29466 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.03■□□□□ 0.96
CASP1P29466 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.03■□□□□ 0.96
CASP1P29466 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.03■□□□□ 0.96
CASP1P29466 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.03■□□□□ 0.96
CASP1P29466 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.03■□□□□ 0.96
CASP1P29466 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.03■□□□□ 0.96
CASP1P29466 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CASP1P29466 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.02■□□□□ 0.96
CASP1P29466 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASP1P29466 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.02■□□□□ 0.96
CASP1P29466 KRT8P32-201ENST00000512863 1461 ntBASIC21.02■□□□□ 0.96
CASP1P29466 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CASP1P29466 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CASP1P29466 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.02■□□□□ 0.96
CASP1P29466 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CASP1P29466 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.02■□□□□ 0.96
CASP1P29466 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.02■□□□□ 0.96
CASP1P29466 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.02■□□□□ 0.96
CASP1P29466 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.02■□□□□ 0.96
CASP1P29466 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.02■□□□□ 0.96
CASP1P29466 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.02■□□□□ 0.96
CASP1P29466 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.02■□□□□ 0.96
CASP1P29466 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CASP1P29466 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASP1P29466 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.02■□□□□ 0.96
CASP1P29466 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.02■□□□□ 0.96
CASP1P29466 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.02■□□□□ 0.95
CASP1P29466 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CASP1P29466 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASP1P29466 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CASP1P29466 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASP1P29466 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASP1P29466 UBE2SP1-201ENST00000450587 669 ntBASIC21.01■□□□□ 0.95
CASP1P29466 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms