Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTR1EP28566 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HTR1EP28566 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.04■□□□□ 0.48
HTR1EP28566 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.04■□□□□ 0.48
HTR1EP28566 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HTR1EP28566 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HTR1EP28566 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.04■□□□□ 0.48
HTR1EP28566 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTR1EP28566 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTR1EP28566 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTR1EP28566 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTR1EP28566 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HTR1EP28566 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HTR1EP28566 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HTR1EP28566 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HTR1EP28566 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.03■□□□□ 0.48
HTR1EP28566 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HTR1EP28566 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.03■□□□□ 0.48
HTR1EP28566 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.03■□□□□ 0.48
HTR1EP28566 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HTR1EP28566 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.03■□□□□ 0.48
HTR1EP28566 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HTR1EP28566 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.03■□□□□ 0.48
HTR1EP28566 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTR1EP28566 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
HTR1EP28566 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.03■□□□□ 0.48
HTR1EP28566 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HTR1EP28566 ABALON-201ENST00000629058 1903 ntBASIC18.02■□□□□ 0.48
HTR1EP28566 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.02■□□□□ 0.48
HTR1EP28566 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HTR1EP28566 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
HTR1EP28566 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 KRASP1-201ENST00000407852 552 ntBASIC18.02■□□□□ 0.48
HTR1EP28566 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 AL390719.1-204ENST00000412397 1219 ntBASIC18.02■□□□□ 0.48
HTR1EP28566 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.02■□□□□ 0.48
HTR1EP28566 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.02■□□□□ 0.48
HTR1EP28566 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
HTR1EP28566 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.02■□□□□ 0.48
HTR1EP28566 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.02■□□□□ 0.48
HTR1EP28566 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.02■□□□□ 0.48
HTR1EP28566 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.02■□□□□ 0.48
HTR1EP28566 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HTR1EP28566 AC113410.3-201ENST00000623366 203 ntBASIC18.02■□□□□ 0.48
HTR1EP28566 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.02■□□□□ 0.48
HTR1EP28566 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HTR1EP28566 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.02■□□□□ 0.47
HTR1EP28566 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.02■□□□□ 0.47
HTR1EP28566 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
HTR1EP28566 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.01■□□□□ 0.47
HTR1EP28566 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.01■□□□□ 0.47
HTR1EP28566 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HTR1EP28566 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HTR1EP28566 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.01■□□□□ 0.47
HTR1EP28566 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HTR1EP28566 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HTR1EP28566 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HTR1EP28566 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HTR1EP28566 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms