Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.83■□□□□ 0.12
APCP25054 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
APCP25054 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
APCP25054 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.83■□□□□ 0.12
APCP25054 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
APCP25054 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
APCP25054 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.83■□□□□ 0.12
APCP25054 KRT18P3-201ENST00000451602 1288 ntBASIC15.83■□□□□ 0.12
APCP25054 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.83■□□□□ 0.12
APCP25054 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.83■□□□□ 0.12
APCP25054 AL596442.2-201ENST00000610240 980 ntBASIC15.83■□□□□ 0.12
APCP25054 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
APCP25054 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APCP25054 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.82■□□□□ 0.12
APCP25054 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.82■□□□□ 0.12
APCP25054 RNA5SP415-201ENST00000517246 115 ntBASIC15.82■□□□□ 0.12
APCP25054 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.82■□□□□ 0.12
APCP25054 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.82■□□□□ 0.12
APCP25054 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 KRT18P28-201ENST00000453838 1332 ntBASIC15.82■□□□□ 0.12
APCP25054 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.82■□□□□ 0.12
APCP25054 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
APCP25054 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.82■□□□□ 0.12
APCP25054 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.82■□□□□ 0.12
APCP25054 AP001269.4-201ENST00000609611 512 ntBASIC15.82■□□□□ 0.12
APCP25054 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
APCP25054 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
APCP25054 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.82■□□□□ 0.12
APCP25054 AP005212.1-201ENST00000581547 1997 ntBASIC15.82■□□□□ 0.12
APCP25054 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
APCP25054 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
APCP25054 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
APCP25054 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.81■□□□□ 0.12
APCP25054 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.81■□□□□ 0.12
APCP25054 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.81■□□□□ 0.12
APCP25054 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
APCP25054 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.81■□□□□ 0.12
APCP25054 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.81■□□□□ 0.12
APCP25054 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.81■□□□□ 0.12
APCP25054 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 KRT8P3-201ENST00000519669 1449 ntBASIC15.81■□□□□ 0.12
APCP25054 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
APCP25054 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 AC244107.1-201ENST00000442033 332 ntBASIC15.81■□□□□ 0.12
APCP25054 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.81■□□□□ 0.12
APCP25054 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APCP25054 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.81■□□□□ 0.12
APCP25054 AC104390.1-201ENST00000555663 520 ntBASIC15.81■□□□□ 0.12
APCP25054 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
APCP25054 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.8■□□□□ 0.12
APCP25054 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
APCP25054 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.8■□□□□ 0.12
APCP25054 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.8■□□□□ 0.12
APCP25054 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.8■□□□□ 0.12
APCP25054 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.8■□□□□ 0.12
APCP25054 AP003733.1-201ENST00000491725 852 ntBASIC15.8■□□□□ 0.12
APCP25054 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.8■□□□□ 0.12
APCP25054 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.8■□□□□ 0.12
APCP25054 AC011840.4-201ENST00000578471 627 ntBASIC15.8■□□□□ 0.12
APCP25054 AC114341.1-201ENST00000618070 349 ntBASIC15.8■□□□□ 0.12
APCP25054 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 AC026310.3-201ENST00000625186 2373 ntBASIC15.8■□□□□ 0.12
APCP25054 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APCP25054 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms