Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 AC005082.1-201ENST00000413042 2259 ntBASIC19.81■□□□□ 0.76
MMP8P22894 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP8P22894 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP8P22894 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
MMP8P22894 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
MMP8P22894 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP8P22894 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.8■□□□□ 0.76
MMP8P22894 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP8P22894 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.8■□□□□ 0.76
MMP8P22894 MIR4497-201ENST00000583208 89 ntBASIC19.8■□□□□ 0.76
MMP8P22894 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP8P22894 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP8P22894 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP8P22894 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
MMP8P22894 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP8P22894 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MMP8P22894 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP8P22894 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP8P22894 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MMP8P22894 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 KRT17P2-201ENST00000300992 1314 ntBASIC19.79■□□□□ 0.76
MMP8P22894 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MMP8P22894 GPAT2P1-201ENST00000444924 1672 ntBASIC19.79■□□□□ 0.76
MMP8P22894 AL499627.1-201ENST00000569373 2188 ntBASIC19.79■□□□□ 0.76
MMP8P22894 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.79■□□□□ 0.76
MMP8P22894 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MMP8P22894 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 AL355075.4-201ENST00000554988 638 ntBASIC19.79■□□□□ 0.76
MMP8P22894 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.79■□□□□ 0.76
MMP8P22894 FITM1-202ENST00000559294 800 ntBASIC19.79■□□□□ 0.76
MMP8P22894 AP000525.1-201ENST00000608286 694 ntBASIC19.79■□□□□ 0.76
MMP8P22894 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 AC008556.1-201ENST00000610908 2040 ntBASIC19.79■□□□□ 0.76
MMP8P22894 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.79■□□□□ 0.76
MMP8P22894 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
MMP8P22894 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP8P22894 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP8P22894 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.79■□□□□ 0.76
MMP8P22894 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP8P22894 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.78■□□□□ 0.76
MMP8P22894 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MMP8P22894 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP8P22894 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP8P22894 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP8P22894 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.78■□□□□ 0.76
MMP8P22894 AL023284.2-201ENST00000405850 579 ntBASIC19.78■□□□□ 0.76
MMP8P22894 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.78■□□□□ 0.76
MMP8P22894 AL023803.3-201ENST00000615559 522 ntBASIC19.78■□□□□ 0.76
MMP8P22894 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP8P22894 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MMP8P22894 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.78■□□□□ 0.76
MMP8P22894 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP8P22894 AC090164.3-201ENST00000610780 2143 ntBASIC19.78■□□□□ 0.76
MMP8P22894 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP8P22894 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP8P22894 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms